RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 ZNF227Q86WZ6 799 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 CCDC116Q8IYX3 515 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 MMP21Q8N119 569 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 GHDCQ8N2G8 530 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 GOLM1Q8NBJ4 401 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 FAM13CQ8NE31 585 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 ADCY4Q8NFM4 1077 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 MAGED4Q96JG8 741 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 GPR137Q96N19 417 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 LRTM1Q9HBL6 345 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 C1orf109Q9NX04 203 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 SIRT5Q9NXA8 310 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 HEY2Q9UBP5 337 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 TRAF6Q9Y4K3 522 aa12.64□□□□□ -0.39
CNOT1-206ENST00000564557 CLEC18AA5D8T8 446 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 TP53I11O14683 189 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 TM9SF1O15321 606 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 ASNA1O43681 348 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 TYROBPO43914 113 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 BCAS2O75934 225 aaPredicted RBP12.63□□□□□ -0.39
CNOT1-206ENST00000564557 BPGMP07738 259 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 FGF4P08620 206 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 CT62P0C5K7 136 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 LINC00032P0C843 101 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 ABOP16442 354 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 DDCP20711 480 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 CNR1P21554 472 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 RFC3P40938 356 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 TMED10P49755 219 aaKnown RBP12.63□□□□□ -0.39
CNOT1-206ENST00000564557 RPP38P78345 283 aaKnown RBP12.63□□□□□ -0.39
CNOT1-206ENST00000564557 SRSF1Q07955 248 aaKnown RBP eCLIP12.63□□□□□ -0.39
CNOT1-206ENST00000564557 MAP4K2Q12851 820 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 EBPQ15125 230 aaKnown RBP12.63□□□□□ -0.39
CNOT1-206ENST00000564557 PRICKLE4Q2TBC4 344 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 C4orf17Q53FE4 359 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 SH2D4BQ5SQS7 431 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 SWT1Q5T5J6 900 aaKnown RBP12.63□□□□□ -0.39
CNOT1-206ENST00000564557 SLC22A10Q63ZE4 541 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 NOXRED1Q6NXP6 359 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 FAM180BQ6P0A1 224 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 PAOXQ6QHF9 649 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 FAM111BQ6SJ93 734 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 CLEC18BQ6UXF7 455 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 LRIG3Q6UXM1 1119 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 EXOC3L1Q86VI1 746 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 CLEC18CQ8NCF0 446 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 AGR3Q8TD06 166 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 TP53INP1Q96A56 240 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 ZBTB9Q96C00 473 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 SPACA9Q96E40 222 aaPredicted RBP12.63□□□□□ -0.39
CNOT1-206ENST00000564557 FAM173AQ9BQD7 235 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 SSU72Q9NP77 194 aaKnown RBP12.63□□□□□ -0.39
CNOT1-206ENST00000564557 SLC35C2Q9NQQ7 365 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 EHD3Q9NZN3 535 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 SUCOQ9UBS9 1254 aaKnown RBP12.63□□□□□ -0.39
CNOT1-206ENST00000564557 PRODH2Q9UF12 536 aa12.63□□□□□ -0.39
CNOT1-206ENST00000564557 WDR91A4D1P6 747 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 G3V3Y1 287 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 CDC40O60508 579 aaKnown RBP eCLIP12.62□□□□□ -0.39
CNOT1-206ENST00000564557 HSPA4LO95757 839 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 CHRNGP07510 517 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 ESRRAP11474 423 aaPredicted RBP12.62□□□□□ -0.39
CNOT1-206ENST00000564557 NTSP30990 170 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 SERPINB4P48594 390 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 PPIAP62937 165 aaKnown RBP12.62□□□□□ -0.39
CNOT1-206ENST00000564557 GALNTL6Q49A17 601 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 KANK2Q63ZY3 851 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 BNC2Q6ZN30 1099 aaPredicted RBP12.62□□□□□ -0.39
CNOT1-206ENST00000564557 RGS9BPQ6ZS82 235 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 FJX1Q86VR8 437 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 SLC22A16Q86VW1 577 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 TICAM1Q8IUC6 712 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 FAM9CQ8IZT9 166 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 OR2M7Q8NG81 312 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 OR5M3Q8NGP4 307 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 TWIST2Q8WVJ9 160 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 CNRIP1Q96F85 164 aaPredicted RBP12.62□□□□□ -0.39
CNOT1-206ENST00000564557 PAIP2Q9BPZ3 127 aaKnown RBP12.62□□□□□ -0.39
CNOT1-206ENST00000564557 TNFRSF12AQ9NP84 129 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 MYNNQ9NPC7 610 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 MAT2BQ9NZL9 334 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 CNIH4Q9P003 139 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 SH3BGRL2Q9UJC5 107 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 ERRFI1Q9UJM3 462 aaPredicted RBP12.62□□□□□ -0.39
CNOT1-206ENST00000564557 TMED5Q9Y3A6 229 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 DNAJC15Q9Y5T4 150 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 ACTL7BQ9Y614 415 aa12.62□□□□□ -0.39
CNOT1-206ENST00000564557 BIRC5O15392 142 aa12.61□□□□□ -0.39
CNOT1-206ENST00000564557 HS6ST1O60243 411 aa12.61□□□□□ -0.39
CNOT1-206ENST00000564557 SLC19A2O60779 497 aa12.61□□□□□ -0.39
CNOT1-206ENST00000564557 ZWINTO95229 277 aa12.61□□□□□ -0.39
CNOT1-206ENST00000564557 STSP08842 583 aa12.61□□□□□ -0.39
CNOT1-206ENST00000564557 DDX5P17844 614 aaKnown RBP12.61□□□□□ -0.39
CNOT1-206ENST00000564557 PRPH2P23942 346 aa12.61□□□□□ -0.39
CNOT1-206ENST00000564557 MAPK1P28482 360 aa12.61□□□□□ -0.39
CNOT1-206ENST00000564557 PTGER1P34995 402 aa12.61□□□□□ -0.39
CNOT1-206ENST00000564557 DCAF7P61962 342 aa12.61□□□□□ -0.39
CNOT1-206ENST00000564557 RPL38P63173 70 aaKnown RBP12.61□□□□□ -0.39
CNOT1-206ENST00000564557 KCNJ2P63252 427 aa12.61□□□□□ -0.39
CNOT1-206ENST00000564557 EXOSC7Q15024 291 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms