RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 DCTPP1Q9H773 170 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 RMND5AQ9H871 391 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 C3orf14Q9HBI5 128 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 SDF2L1Q9HCN8 221 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 FARSBQ9NSD9 589 aaKnown RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 CHRNA9Q9UGM1 479 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 ATP6V1HQ9UI12 483 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 LNPEPQ9UIQ6 1025 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 CHMP2BQ9UQN3 213 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 PYGO1Q9Y3Y4 419 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 SF3B1O75533 1304 aaKnown RBP eCLIP2.18□□□□□ -2.063e-6■■■■■ 78.1
CHD9-209ENST00000564255 CARMIL1Q5VZK9 1371 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 ZNF724A8MTY0 619 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 SDHDO14521 159 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 XPO1O14980 1071 aaKnown RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 PRAMEF12O95522 483 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 CALCAP01258 141 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 EPB41P11171 864 aaKnown RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 PSMA5P28066 241 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 ACADVLP49748 655 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 ABCE1P61221 599 aaKnown RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 RBBP4Q09028 425 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 PARP6Q2NL67 630 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 SLC36A3Q495N2 470 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 ATRAIDQ6UW56 229 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 FRRS1Q6ZNA5 592 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 CHDHQ8NE62 594 aaPredicted RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 OR2T3Q8NH03 318 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 ATP8B4Q8TF62 1192 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 DLX4Q92988 240 aaPredicted RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 PINX1Q96BK5 328 aaKnown RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 CASD1Q96PB1 797 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 VPS35Q96QK1 796 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 NODALQ96S42 347 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 CALHM2Q9HA72 323 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 LPAR2Q9HBW0 351 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 TRPV5Q9NQA5 729 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 KLF2Q9Y5W3 355 aaPredicted RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 IKBKGQ9Y6K9 419 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 SCN5AQ14524 2016 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 A0A087X002 238 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 A0A0A6YYD4 124 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 FBLL1A6NHQ2 334 aaKnown RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 ALOX15BO15296 676 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 OPN1MWP04001 364 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 ANXA4P09525 319 aaPredicted RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 OPN1MW2P0DN77 364 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 OPN1MW3P0DN78 364 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 TSFMP43897 325 aaKnown RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 ERVK-16P61578 105 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 NFATC2Q13469 925 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 ENPP2Q13822 863 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 GCKRQ14397 625 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 CDKN3Q16667 212 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 MTHFSDQ2M296 383 aaKnown RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 ZNF311Q5JNZ3 666 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 WDR25Q64LD2 544 aaPredicted RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 CASC1Q6TDU7 716 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 TMEM184AQ6ZMB5 413 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 VASH2Q86V25 355 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 FAM131BQ86XD5 332 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 RAB42Q8N4Z0 105 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 DDHD1Q8NEL9 900 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 FBXO25Q8TCJ0 367 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 C4orf36Q96KX1 117 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 ZSCAN5AQ9BUG6 496 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 TMEM117Q9H0C3 514 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 ALG9Q9H6U8 611 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 Q9HAA7 133 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 PLEKHA3Q9HB20 300 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 PURGQ9UJV8 347 aaKnown RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 CSNK1G3Q9Y6M4 447 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 DDX49Q9Y6V7 483 aaKnown RBP2.18□□□□□ -2.06
CHD9-209ENST00000564255 MYH15Q9Y2K3 1946 aa2.18□□□□□ -2.06
CHD9-209ENST00000564255 TRBV5-4A0A0C4DH59 114 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 MPTX1A8MV57 137 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 IMPA2O14732 288 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 FOSL2P15408 326 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 ZNF26P17031 533 aaPredicted RBP2.17□□□□□ -2.06
CHD9-209ENST00000564255 GLRA2P23416 452 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 PPP2R1AP30153 589 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 FCGR2CP31995 323 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 METAP1P53582 386 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 CYCSP99999 105 aaKnown RBP2.17□□□□□ -2.06
CHD9-209ENST00000564255 DHODHQ02127 395 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 HLA-BQ31612 363 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 CENPPQ6IPU0 288 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 RGS9BPQ6ZS82 235 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 GPBP1Q86WP2 473 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 TBC1D10CQ8IV04 446 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 ZDHHC21Q8IVQ6 265 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 PYROXD2Q8N2H3 581 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 C9orf106Q8NAJ2 232 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 OR5AU1Q8NGC0 362 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 OSTF1Q92882 214 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 C19orf43Q9BQ61 176 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 IL1RAPQ9NPH3 570 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 TEX10Q9NXF1 929 aaPredicted RBP2.17□□□□□ -2.06
CHD9-209ENST00000564255 GPR83Q9NYM4 423 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms