RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 MYZAPP0CAP1 466 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 GP1BBP13224 206 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 CNR1P21554 472 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 PLGLB1Q02325 96 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 ZNF750Q32MQ0 723 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 C1QL3Q5VWW1 255 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 SLC22A10Q63ZE4 541 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 CLEC6AQ6EIG7 209 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 PAOXQ6QHF9 649 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 FAM47EQ6ZV65 393 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 SLC22A16Q86VW1 577 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 MMP21Q8N119 569 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 ZNF615Q8N8J6 731 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 ERP27Q96DN0 273 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 CNRIP1Q96F85 164 aaPredicted RBP18.34■□□□□ 0.53
CMTM3-207ENST00000564060 SSU72Q9NP77 194 aaKnown RBP18.34■□□□□ 0.53
CMTM3-207ENST00000564060 MIEF1Q9NQG6 463 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 MAT2BQ9NZL9 334 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 CNIH4Q9P003 139 aa18.34■□□□□ 0.53
CMTM3-207ENST00000564060 TYROBPO43914 113 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 ZNF354AO60765 605 aaPredicted RBP18.33■□□□□ 0.52
CMTM3-207ENST00000564060 ERLIN1O75477 346 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 BCAS2O75934 225 aaPredicted RBP18.33■□□□□ 0.52
CMTM3-207ENST00000564060 FGF4P08620 206 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 ABOP16442 354 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 DDCP20711 480 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 CA7P43166 264 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 NR0B1P51843 470 aaKnown RBP18.33■□□□□ 0.52
CMTM3-207ENST00000564060 ZNF791Q3KP31 576 aaPredicted RBP18.33■□□□□ 0.52
CMTM3-207ENST00000564060 KANK2Q63ZY3 851 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 IKBIPQ70UQ0 350 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 FJX1Q86VR8 437 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 ZNF441Q8N8Z8 693 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 CDC26Q8NHZ8 85 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 ZNF675Q8TD23 568 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 EXOSC8Q96B26 276 aaKnown RBP18.33■□□□□ 0.52
CMTM3-207ENST00000564060 ZNF681Q96N22 645 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 MECRQ9BV79 373 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 MYNNQ9NPC7 610 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 PRODH2Q9UF12 536 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 BCAP29Q9UHQ4 241 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 FIS1Q9Y3D6 152 aa18.33■□□□□ 0.52
CMTM3-207ENST00000564060 NINQ8N4C6 2090 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 COL12A1Q99715 3063 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 TP53I11O14683 189 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 CTIFO43310 598 aaKnown RBP18.32■□□□□ 0.52
CMTM3-207ENST00000564060 SEC22BO75396 215 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 MPIP34949 423 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 RPP38P78345 283 aaKnown RBP18.32■□□□□ 0.52
CMTM3-207ENST00000564060 C2orf80Q0P641 193 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 NTRK2Q16620 822 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 RNFT1Q5M7Z0 435 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 TBCELQ5QJ74 424 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 CEP85LQ5SZL2 805 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 NOXRED1Q6NXP6 359 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 LYPD8Q6UX82 237 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 Q6ZPB1 254 aaPredicted RBP18.32■□□□□ 0.52
CMTM3-207ENST00000564060 SPPL2CQ8IUH8 684 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 CLYBLQ8N0X4 340 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 EID3Q8N140 333 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 FAM13CQ8NE31 585 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 PAQR8Q8TEZ7 354 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 CTHRC1Q96CG8 243 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 TNFRSF12AQ9NP84 129 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 SLC35C2Q9NQQ7 365 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 DEPPQ9NTK1 212 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 C1orf109Q9NX04 203 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 ZNF639Q9UID6 485 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 ZNF835Q9Y2P0 537 aa18.32■□□□□ 0.52
CMTM3-207ENST00000564060 POLR3HQ9Y535 204 aaPredicted RBP18.32■□□□□ 0.52
CMTM3-207ENST00000564060 HS6ST1O60243 411 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 SLITRK5O94991 958 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 BPGMP07738 259 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 CCL3P10147 92 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 S1PR1P21453 382 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 RFC3P40938 356 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 DCAF7P61962 342 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 RPS6KA2Q15349 733 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 CEBPEQ15744 281 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 ARL13AQ5H913 290 aaPredicted RBP18.31■□□□□ 0.52
CMTM3-207ENST00000564060 FAM111BQ6SJ93 734 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 CCDC116Q8IYX3 515 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 FBXW8Q8N3Y1 598 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 ADCY4Q8NFM4 1077 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 ADIPOR1Q96A54 375 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 BBS4Q96RK4 519 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 TTTY12Q9BZ98 90 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 CENPHQ9H3R5 247 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 IL1RL2Q9HB29 575 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 LRTM1Q9HBL6 345 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 SH2D2AQ9NP31 389 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 PLEKHB1Q9UF11 243 aaPredicted RBP18.31■□□□□ 0.52
CMTM3-207ENST00000564060 BOKQ9UMX3 212 aaPredicted RBP18.31■□□□□ 0.52
CMTM3-207ENST00000564060 TMED5Q9Y3A6 229 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 TRAF6Q9Y4K3 522 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 CCL27Q9Y4X3 112 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 NPFFR2Q9Y5X5 522 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 ACTL7BQ9Y614 415 aa18.31■□□□□ 0.52
CMTM3-207ENST00000564060 SPTAN1Q13813 2472 aaKnown RBP18.31■□□□□ 0.52
CMTM3-207ENST00000564060 USP9YO00507 2555 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms