RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 DGAT2Q96PD7 388 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 SERHL2Q9H4I8 314 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 MKKSQ9NPJ1 570 aaPredicted RBP20.56■□□□□ 0.88
LINC01960-201ENST00000563759 LANCL2Q9NS86 450 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 MMACHCQ9Y4U1 282 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 MATN1P21941 496 aa20.55■□□□□ 0.88
LINC01960-201ENST00000563759 IGLV3-21P80748 117 aaPredicted RBP20.55■□□□□ 0.88
LINC01960-201ENST00000563759 PRICKLE4Q2TBC4 344 aa20.55■□□□□ 0.88
LINC01960-201ENST00000563759 OR5D16Q8NGK9 328 aa20.55■□□□□ 0.88
LINC01960-201ENST00000563759 NFKBIDQ8NI38 313 aa20.55■□□□□ 0.88
LINC01960-201ENST00000563759 ZNF675Q8TD23 568 aa20.55■□□□□ 0.88
LINC01960-201ENST00000563759 RAB8BQ92930 207 aa20.55■□□□□ 0.88
LINC01960-201ENST00000563759 EFHD1Q9BUP0 239 aa20.55■□□□□ 0.88
LINC01960-201ENST00000563759 MAT2BQ9NZL9 334 aa20.55■□□□□ 0.88
LINC01960-201ENST00000563759 ANAPC2Q9UJX6 822 aa20.55■□□□□ 0.88
LINC01960-201ENST00000563759 AP4S1Q9Y587 144 aa20.55■□□□□ 0.88
LINC01960-201ENST00000563759 CPNE3O75131 537 aaKnown RBP20.54■□□□□ 0.88
LINC01960-201ENST00000563759 SERPINA1P01009 418 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 ARAFP10398 606 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 AQP1P29972 269 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 SLC7A1P30825 629 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 CDK6Q00534 326 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 MC2RQ01718 297 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 SERTAD2Q14140 314 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.54■□□□□ 0.88
LINC01960-201ENST00000563759 TRMT12Q53H54 448 aaKnown RBP20.54■□□□□ 0.88
LINC01960-201ENST00000563759 VWA2Q5GFL6 755 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 ZC3H7AQ8IWR0 971 aaKnown RBP20.54■□□□□ 0.88
LINC01960-201ENST00000563759 GALNT12Q8IXK2 581 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 VWA5B2Q8N398 1253 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 FBXO30Q8TB52 745 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 DOK4Q8TEW6 326 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 PTCHD1Q96NR3 888 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 YIPF4Q9BSR8 244 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 THUMPD1Q9NXG2 353 aaKnown RBP20.54■□□□□ 0.88
LINC01960-201ENST00000563759 CTSFQ9UBX1 484 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 ANGPT4Q9Y264 503 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 TMEM247A6NEH6 219 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 HMGN4O00479 90 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 MAGEA8P43361 318 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 SLC34A1Q06495 639 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 NKAIN1Q4KMZ8 207 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 INTS11Q5TA45 600 aaKnown RBP20.54■□□□□ 0.88
LINC01960-201ENST00000563759 QSOX2Q6ZRP7 698 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 SLC44A2Q8IWA5 706 aaPredicted RBP20.54■□□□□ 0.88
LINC01960-201ENST00000563759 PRSS58Q8IYP2 241 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 ADGRG5Q8IZF4 528 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 OR52E4Q8NGH9 312 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 OTUB1Q96FW1 271 aaPredicted RBP20.54■□□□□ 0.88
LINC01960-201ENST00000563759 DUS3LQ96G46 650 aaKnown RBP20.54■□□□□ 0.88
LINC01960-201ENST00000563759 NECTIN3Q9NQS3 549 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 FBXO8Q9NRD0 319 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 NTMQ9P121 344 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 PCDHGA1Q9Y5H4 931 aa20.54■□□□□ 0.88
LINC01960-201ENST00000563759 RIF1Q5UIP0 2472 aaKnown RBP20.53■□□□□ 0.88
LINC01960-201ENST00000563759 A0A087WV62 115 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 C5orf58C9J3I9 102 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 PLOD3O60568 738 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 IFNA16P05015 189 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 BCHEP06276 602 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 OR12D1P0DN82 309 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 UMPSP11172 480 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 STT3AP46977 705 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 MAPK10P53779 464 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 TRIP6Q15654 476 aaKnown RBP20.53■□□□□ 0.88
LINC01960-201ENST00000563759 TBCELQ5QJ74 424 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 MED25Q71SY5 747 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 COX15Q7KZN9 410 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 GALNT10Q86SR1 603 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 PIP4P1Q86T03 277 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 SLC30A8Q8IWU4 369 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 RIT1Q92963 219 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 SLCO4A1Q96BD0 722 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 SEPHS2Q99611 448 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 PELOQ9BRX2 385 aaKnown RBP20.53■□□□□ 0.88
LINC01960-201ENST00000563759 A4GALTQ9NPC4 353 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 ADAP2Q9NPF8 381 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 DCAF13Q9NV06 445 aaKnown RBP20.53■□□□□ 0.88
LINC01960-201ENST00000563759 SLC39A1Q9NY26 324 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 STOML1Q9UBI4 398 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 P2RX2Q9UBL9 471 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 C19orf53Q9UNZ5 99 aaPredicted RBP20.53■□□□□ 0.88
LINC01960-201ENST00000563759 LOXL2Q9Y4K0 774 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 CLDN16Q9Y5I7 305 aa20.53■□□□□ 0.88
LINC01960-201ENST00000563759 ZNF292O60281 2723 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 TMX2-CTNND1H3BSU7 103 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 CT62P0C5K7 136 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 KDELR2P33947 212 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 DCDP81605 110 aaKnown RBP20.52■□□□□ 0.88
LINC01960-201ENST00000563759 OCA2Q04671 838 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 FHL5Q5TD97 284 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 MFSD12Q6NUT3 480 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 DGAT2L6Q6ZPD8 337 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 MIPOL1Q8TD10 442 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 XAGE5Q8WWM1 108 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 C16orf58Q96GQ5 468 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 ACTRT3Q9BYD9 372 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 CXorf21Q9HAI6 301 aa20.52■□□□□ 0.88
LINC01960-201ENST00000563759 CCM2LQ9NUG4 571 aaPredicted RBP20.52■□□□□ 0.88
LINC01960-201ENST00000563759 TOR4AQ9NXH8 423 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms