RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 FAM76AQ8TAV0 307 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 KAT2AQ92830 837 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 ADIPOR1Q96A54 375 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 TSSK3Q96PN8 268 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 PELOQ9BRX2 385 aaKnown RBP12.86□□□□□ -0.35
TPM1-230ENST00000561266 C1orf50Q9BV19 199 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 BRINP2Q9C0B6 783 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 WWTR1Q9GZV5 400 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 OR10A5Q9H207 317 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 SLC35C2Q9NQQ7 365 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 ABI3Q9P2A4 366 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 HAO1Q9UJM8 370 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 FREM3P0C091 2139 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 POLEQ07864 2286 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 GTF3C1Q12789 2109 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 MYO1GB0I1T2 1018 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 FCHO1O14526 889 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 AKAP10O43572 662 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 SLC25A12O75746 678 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 CYB561P49447 251 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 TDGF1P3P51864 188 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 SLC18A1P54219 525 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 PDCD2Q16342 344 aaPredicted RBP12.85□□□□□ -0.35
TPM1-230ENST00000561266 MAPKAPK3Q16644 382 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 ZNF628Q5EBL2 1059 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 C6orf136Q5SQH8 315 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 FHL5Q5TD97 284 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 DESI1Q6ICB0 168 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.85□□□□□ -0.35
TPM1-230ENST00000561266 LRRC25Q8N386 305 aaPredicted RBP12.85□□□□□ -0.35
TPM1-230ENST00000561266 TMEM156Q8N614 296 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 C16orf52Q8NHV5 167 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 NUBPLQ8TB37 319 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 FAR1Q8WVX9 515 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 GAL3ST4Q96RP7 486 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 COPS7AQ9UBW8 275 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 RAP2CQ9Y3L5 183 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 ZNF780BQ9Y6R6 833 aa12.85□□□□□ -0.35
TPM1-230ENST00000561266 ZNF407Q9C0G0 2248 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 GOLGA6L10A6NI86 522 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 G3V3Y1 287 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 ZNHIT1O43257 154 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 NME2P1O60361 137 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 SNNO75324 88 aaPredicted RBP12.84□□□□□ -0.35
TPM1-230ENST00000561266 RASAL1O95294 804 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 CHEK2O96017 543 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 NEFHP12036 1026 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 EFNA1P20827 205 aaPredicted RBP12.84□□□□□ -0.35
TPM1-230ENST00000561266 GPX3P22352 226 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 NME2P22392 152 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 GRK2P25098 689 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 RFC3P40938 356 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 EMDP50402 254 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 GPR85P60893 370 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 HEPACAMQ14CZ8 416 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 ZNF791Q3KP31 576 aaPredicted RBP12.84□□□□□ -0.35
TPM1-230ENST00000561266 HDXQ7Z353 690 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 SULF2Q8IWU5 870 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 CYP4Z2PQ8N1L4 340 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 VWA5B2Q8N398 1253 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 LIX1Q8N485 282 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 CPSF7Q8N684 471 aaKnown RBP12.84□□□□□ -0.35
TPM1-230ENST00000561266 GALNT11Q8NCW6 608 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 OR7G2Q8NG99 324 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 ASB15Q8WXK1 588 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 CIDECQ96AQ7 238 aaPredicted RBP12.84□□□□□ -0.35
TPM1-230ENST00000561266 METTL2AQ96IZ6 378 aaKnown RBP12.84□□□□□ -0.35
TPM1-230ENST00000561266 ART5Q96L15 291 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 ATP6V1G3Q96LB4 118 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 FRMD6Q96NE9 622 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 CCT7Q99832 543 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 SLX1AQ9BQ83 275 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 STMN4Q9H169 189 aaPredicted RBP12.84□□□□□ -0.35
TPM1-230ENST00000561266 TSPAN10Q9H1Z9 355 aaPredicted RBP12.84□□□□□ -0.35
TPM1-230ENST00000561266 GLIPR2Q9H4G4 154 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 TAS2R7Q9NYW3 318 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 EHD3Q9NZN3 535 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 PSME2Q9UL46 239 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.84□□□□□ -0.35
TPM1-230ENST00000561266 PCDHGB6Q9Y5F9 930 aa12.84□□□□□ -0.35
TPM1-230ENST00000561266 ASPDHA6ND91 283 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 CCL3P10147 92 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 CD46P15529 392 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 RPL14P50914 215 aaKnown RBP12.83□□□□□ -0.36
TPM1-230ENST00000561266 PDE7AQ13946 482 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 PTGR1Q14914 329 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 NNATQ16517 81 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 EIF2S3LQ2VIR3 472 aaKnown RBP12.83□□□□□ -0.36
TPM1-230ENST00000561266 IL23RQ5VWK5 629 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 PRR22Q8IZ63 422 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 C7orf57Q8NEG2 295 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 OR52R1Q8NGF1 315 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 OR5L2Q8NGL0 311 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 ZNF675Q8TD23 568 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 ITPAQ9BY32 194 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 NUF2Q9BZD4 464 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 NXF5Q9H1B4 397 aaKnown RBP12.83□□□□□ -0.36
TPM1-230ENST00000561266 AKTIPQ9H8T0 292 aa12.83□□□□□ -0.36
TPM1-230ENST00000561266 PROK2Q9HC23 129 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms