RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 NPHS1O60500 1241 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 SLC19A2O60779 497 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 PDE9AO76083 593 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 STSP08842 583 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 CNR1P21554 472 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 GSTM5P46439 218 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 KCNJ2P63252 427 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 HSF1Q00613 529 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 FUT7Q11130 342 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 NNATQ16517 81 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 PRICKLE4Q2TBC4 344 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 RNFT1Q5M7Z0 435 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 SH2D4BQ5SQS7 431 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 PRAMEF20Q5VT98 475 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 SLC22A10Q63ZE4 541 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 NOXRED1Q6NXP6 359 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 GALNT18Q6P9A2 607 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 TMEM64Q6YI46 380 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 NUDCD3Q8IVD9 361 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 GOLM1Q8NBJ4 401 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 C16orf52Q8NHV5 167 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 SPACA9Q96E40 222 aaPredicted RBP11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 ZIM3Q96PE6 472 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 BBS4Q96RK4 519 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 FAM173AQ9BQD7 235 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 LRTM1Q9HBL6 345 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 DEPPQ9NTK1 212 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 C1orf109Q9NX04 203 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 MAT2BQ9NZL9 334 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 SUCOQ9UBS9 1254 aaKnown RBP11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 CFL2Q9Y281 166 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 TMEM233B4DJY2 109 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 CCL21O00585 134 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 TYROBPO43914 113 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 LDLRP01130 860 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 CLPSP04118 112 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 BPGMP07738 259 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 RNF224P0DH78 156 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 CCL3P10147 92 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 ESRRAP11474 423 aaPredicted RBP11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 PCSK2P16519 638 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 DDCP20711 480 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 MPIP34949 423 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 PIGAP37287 484 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 DNASE1L1P49184 302 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 TMED10P49755 219 aaKnown RBP11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 PPIAP62937 165 aaKnown RBP11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 MRPS35P82673 323 aaKnown RBP11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 DUSP2Q05923 314 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 MAP4K2Q12851 820 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.97□□□□□ -0.493e-6■■■□□ 15.4
CTDSPL2-209ENST00000560620 ZNF791Q3KP31 576 aaPredicted RBP11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 GALNTL6Q49A17 601 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 TRMT12Q53H54 448 aaKnown RBP11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 KANK2Q63ZY3 851 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 CROCCP2Q86T23 111 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 EXOC3L1Q86VI1 746 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 SLC22A16Q86VW1 577 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 TICAM1Q8IUC6 712 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 HOMEZQ8IX15 550 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 PRR22Q8IZ63 422 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 CLYBLQ8N0X4 340 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 ZNF615Q8N8J6 731 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 ZFP62Q8NB50 900 aaPredicted RBP11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 OR52R1Q8NGF1 315 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 FAM76AQ8TAV0 307 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 TWIST2Q8WVJ9 160 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 KAT2AQ92830 837 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 TP53INP1Q96A56 240 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 PKNOX2Q96KN3 472 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 JSRP1Q96MG2 331 aaPredicted RBP11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 PAIP2Q9BPZ3 127 aaKnown RBP11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 DEFB127Q9H1M4 99 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 SLC35C2Q9NQQ7 365 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 TRAF6Q9Y4K3 522 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 DNAJC15Q9Y5T4 150 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 NPFFR2Q9Y5X5 522 aa11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 ASH1LQ9NR48 2969 aaKnown RBP11.97□□□□□ -0.49
CTDSPL2-209ENST00000560620 A0A0G2JMM0 328 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 A0A1B0GTH9 108 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 A0A1W2PPB8 328 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 A0A1W2PRS3 328 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 PINLYPA6NC86 204 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 KIR3DP1A8MWS1 328 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 TP53I11O14683 189 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 ZNHIT1O43257 154 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 ZG16O60844 167 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 LRATO95237 230 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 NADKO95544 446 aaPredicted RBP11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 HSPA4LO95757 839 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 JUNP05412 331 aaKnown RBP11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 FBXO45P0C2W1 286 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 GPX3P22352 226 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 NTSP30990 170 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 SERPINB5P36952 375 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 NCBP2P52298 156 aaKnown RBP eCLIP11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 RPL38P63173 70 aaKnown RBP11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 PAOXQ6QHF9 649 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 SPPL2CQ8IUH8 684 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 SIAH3Q8IW03 269 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms