RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 IGHV4-39P01824 125 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 SOD3P08294 240 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 TBXA2RP21731 343 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 CPN2P22792 545 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 CFPP27918 469 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 PTPN6P29350 595 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 CASP3P42574 277 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 STT3AP46977 705 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 CDKN2DP55273 166 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 WDR4P57081 412 aaKnown RBP8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 TIAL1Q01085 375 aaKnown RBP eCLIP8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 RCN2Q14257 317 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 SETDB1Q15047 1291 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 EBPQ15125 230 aaKnown RBP8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 TMEM249Q2WGJ8 235 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 C18orf21Q32NC0 220 aaPredicted RBP8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 TIGD3Q6B0B8 471 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 LRRC8EQ6NSJ5 796 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 ABHD17CQ6PCB6 329 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 BHLHB9Q6PI77 547 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 TMIGD1Q6UXZ0 262 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 C12orf54Q6X4T0 127 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 SH2D5Q6ZV89 423 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 CHMP1BQ7LBR1 199 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 DND1Q8IYX4 353 aaKnown RBP8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 TAGAPQ8N103 731 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 DEPDC4Q8N2C3 294 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 UBL4BQ8N7F7 174 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 OR2L5Q8NG80 312 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 FBXL20Q96IG2 436 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 HS6ST2Q96MM7 605 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 GBP4Q96PP9 640 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 NTMT1Q9BV86 223 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 PHACTR1Q9C0D0 580 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 C12orf65Q9H3J6 166 aaKnown RBP8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 GALNT9Q9HCQ5 603 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 C20orf96Q9NUD7 363 aaPredicted RBP8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 LPAR3Q9UBY5 353 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 FBXO5Q9UKT4 447 aa8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 MAGED1Q9Y5V3 778 aaPredicted RBP8.09□□□□□ -1.11
SNRPA1-208ENST00000559686 C2orf92A0A1B0GVN3 265 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 SYNDIG1LA6NDD5 238 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 SLC22A20A6NK97 555 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 CAPN14A8MX76 684 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 GOLGA6L22H0YM25 854 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 EIF3FO00303 357 aaPredicted RBP8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 SAP18O00422 153 aaKnown RBP8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 CLOCKO15516 846 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 OR10H2O60403 315 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 WDR47O94967 919 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 TBX6O95947 436 aaPredicted RBP8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 C1GALT1C1LP0DN25 315 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 PTNP21246 168 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 SSTR4P31391 388 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 KIR2DL2P43627 348 aaPredicted RBP8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 VPS41P49754 854 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 EEF1A1P68104 462 aaKnown RBP8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 PLIN5Q00G26 463 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 ETFDHQ16134 617 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 NNATQ16517 81 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 EEF1A1P5Q5VTE0 462 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 HLA-DQA1Q5Y7H0 255 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 ZNF793Q6ZN11 406 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 GSTA5Q7RTV2 222 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 VN1R5Q7Z5H4 357 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 ADGRE4PQ86SQ3 457 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 IFNEQ86WN2 208 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 RBM18Q96H35 190 aaKnown RBP8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 C1orf159Q96HA4 380 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 TMEM41AQ96HV5 264 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 EGFL8Q99944 293 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 RHNO1Q9BSD3 238 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 SORBS1Q9BX66 1292 aaKnown RBP8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 TSGA10Q9BZW7 698 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 PRDM7Q9NQW5 492 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 IARS2Q9NSE4 1012 aaKnown RBP8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 ELOVL5Q9NYP7 299 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 TAS2R13Q9NYV9 303 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 MOCS1Q9NZB8 636 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 IKZF3Q9UKT9 509 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 KCNE2Q9Y6J6 123 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 SPACA6W5XKT8 324 aa8.08□□□□□ -1.12
SNRPA1-208ENST00000559686 TGP01266 2768 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 SYCE3A1L190 88 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 FRG2CA6NGY1 282 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 LRRC14BA6NHZ5 514 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 WASHC1A8K0Z3 465 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 AKR1B15C9JRZ8 316 aaPredicted RBP8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 GOLGA8MH3BSY2 632 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 OVOL3O00110 214 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 AP3B1O00203 1094 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 ALOX15P16050 662 aaPredicted RBP8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 KRT15P19012 456 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 CHMP24386 653 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 ATP5A1P25705 553 aaKnown RBP8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 CNTFP26441 200 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 GDF5P43026 501 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 LHX2P50458 406 aa8.07□□□□□ -1.12
SNRPA1-208ENST00000559686 AP1S2P56377 157 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms