RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ARL16Q0P5N6 197 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 ADIPOQQ15848 244 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 PNLIPRP3Q17RR3 467 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 ACCSLQ4AC99 568 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 ZNF805Q5CZA5 627 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 TCP11X2Q5H9J9 407 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 MPP7Q5T2T1 576 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 GFI1BQ5VTD9 330 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 NSUN5P2Q63ZY6 315 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 KCTD16Q68DU8 428 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 SPECC1LQ69YQ0 1117 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 TRNP1Q6NT89 227 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 SLC39A4Q6P5W5 647 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 KLHL35Q6PF15 583 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 TMEM207Q6UWW9 146 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 RAD9BQ6WBX8 426 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 FOXL2NBQ6ZUU3 175 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 ZNF329Q86UD4 541 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 SLC9B2Q86UD5 537 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 KMT5CQ86Y97 462 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 HIPK1Q86Z02 1210 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 MUC20Q8N307 709 aaPredicted RBP5.27□□□□□ -1.57
RTF1-204ENST00000558117 BCORP1Q8N888 145 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 DNAAF3Q8N9W5 541 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 DENND6BQ8NEG7 585 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 OR8K5Q8NH50 307 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 HM13Q8TCT9 377 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 SLC44A1Q8WWI5 657 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 MRPL45Q9BRJ2 306 aaKnown RBP5.27□□□□□ -1.57
RTF1-204ENST00000558117 HGH1Q9BTY7 390 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 TRPM6Q9BX84 2022 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 DMAP1Q9NPF5 467 aaPredicted RBP5.27□□□□□ -1.57
RTF1-204ENST00000558117 CWC15Q9P013 229 aaKnown RBP5.27□□□□□ -1.57
RTF1-204ENST00000558117 FBXL2Q9UKC9 423 aa5.27□□□□□ -1.57
RTF1-204ENST00000558117 SEC16AO15027 2179 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 CMYA5Q8N3K9 4069 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 A8MU76 341 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 FAM90A26D6RGX4 464 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 C16orf97H3BN30 126 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 ANKRD28O15084 1053 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 ALOX15BO15296 676 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 LMX1BO60663 402 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 TBL1XO60907 577 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 RAF1P04049 648 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 ATP1A1P05023 1023 aaKnown RBP5.26□□□□□ -1.57
RTF1-204ENST00000558117 UMODP07911 640 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 CDH2P19022 906 aaPredicted RBP5.26□□□□□ -1.57
RTF1-204ENST00000558117 RPA1P27694 616 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 EEF1DP29692 281 aaKnown RBP5.26□□□□□ -1.57
RTF1-204ENST00000558117 LIG4P49917 911 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 TAS2R40P59535 323 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 TFF3Q07654 80 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 MAD2L1Q13257 205 aaPredicted RBP5.26□□□□□ -1.57
RTF1-204ENST00000558117 IRF3Q14653 427 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 SYCP1Q15431 976 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 C3AR1Q16581 482 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 C11orf88Q6PI97 169 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 CCDC91Q7Z6B0 441 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 GPR180Q86V85 440 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 WDR49Q8IV35 697 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 MFN1Q8IWA4 741 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 CSGALNACT2Q8N6G5 542 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 OR1J2Q8NGS2 313 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 GDAP1Q8TB36 358 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 TM9SF4Q92544 642 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 NR4A3Q92570 626 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 AZIN2Q96A70 460 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 PGAP3Q96FM1 320 aaPredicted RBP5.26□□□□□ -1.57
RTF1-204ENST00000558117 CMTM3Q96MX0 182 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 QRFPRQ96P65 431 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 UHRF2Q96PU4 802 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 SMC6Q96SB8 1091 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 IL17CQ9P0M4 197 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 KIF3AQ9Y496 699 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 CCL27Q9Y4X3 112 aa5.26□□□□□ -1.57
RTF1-204ENST00000558117 KLF18A0A0U1RQI7 1052 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 ASPDHA6ND91 283 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 IGLON5A6NGN9 336 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 ZW10O43264 779 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 OR2C1O95371 312 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 CRYAAP02489 173 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 ALPPP05187 535 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 TPOP07202 933 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 HOXD4P09016 255 aaPredicted RBP5.25□□□□□ -1.57
RTF1-204ENST00000558117 OR52Z1P0C646 297 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 UGT1A1P22309 533 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 PPARGP37231 505 aaPredicted RBP5.25□□□□□ -1.57
RTF1-204ENST00000558117 MRPS34P82930 218 aaKnown RBP5.25□□□□□ -1.57
RTF1-204ENST00000558117 TFAMQ00059 246 aaKnown RBP5.25□□□□□ -1.57
RTF1-204ENST00000558117 UBXN1Q04323 297 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 GTF2H2Q13888 395 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 KRTCAP3Q53RY4 240 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 ODF2Q5BJF6 829 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 RAB41Q5JT25 222 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 LCN10Q6JVE6 187 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 GTF2H2CQ6P1K8 395 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 FAM199XQ6PEV8 388 aaPredicted RBP5.25□□□□□ -1.57
RTF1-204ENST00000558117 RAPH1Q70E73 1250 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 ERN2Q76MJ5 926 aaKnown RBP5.25□□□□□ -1.57
RTF1-204ENST00000558117 TAF8Q7Z7C8 310 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms