RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CEP19Q96LK0 163 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CCDC43Q96MW1 224 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF300Q96RE9 604 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 RIT2Q99578 217 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 RHNO1Q9BSD3 238 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CALN1Q9BXU9 219 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CRNKL1Q9BZJ0 848 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SDF2L1Q9HCN8 221 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ZDHHC4Q9NPG8 344 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PANK4Q9NVE7 773 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 EURLQ9NYK6 297 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TMOD3Q9NYL9 352 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 NOCTQ9UK39 431 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PAIP2BQ9ULR5 123 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 KCNK7Q9Y2U2 307 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 FADS3Q9Y5Q0 445 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 RB1CC1Q8TDY2 1594 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CECR2Q9BXF3 1484 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 NUP160Q12769 1436 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 RTL1A6NKG5 1358 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 PLEKHG1Q9ULL1 1385 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 FRMPD4Q14CM0 1322 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 MAPK8IP3Q9UPT6 1336 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 TRBV2A0A0J9YWF9 115 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ATP6AP2A0A1C7CYW4 349 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 GOLGA6L19H0YKK7 550 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 GOLGA8RI6L899 631 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 LAD1O00515 517 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CHUKO15111 745 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 PPIP5K2O43314 1243 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 GATCO43716 136 aaKnown RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ECE2O60344 883 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 KERAO60938 352 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 BRI3O95415 125 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ACSL3O95573 720 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 OXSR1O95747 527 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 S100A9P06702 114 aaKnown RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 PATE4P0C8F1 98 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 UBTFL6P0CB48 400 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CEACAM1P13688 526 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 F3P13726 295 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CYP2A7P20853 494 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 GALP22466 123 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 MAPK3P27361 379 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ALDH4A1P30038 563 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SERPINB6P35237 376 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SFTPDP35247 375 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 GCKP35557 465 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 PPP1R2P41236 205 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CRKLP46109 303 aaKnown RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 RABIFP47224 123 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 NPBWR1P48145 328 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SLC11A1P49279 550 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SUCLG1P53597 346 aaKnown RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CRYBA2P53672 197 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CLDN17P56750 224 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 LINC01547P58512 204 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CYCSP99999 105 aaKnown RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF33BQ06732 778 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CETN1Q12798 172 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 FADDQ13158 208 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CHRNA6Q15825 494 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 HADHQ16836 314 aaKnown RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SGSM1Q2NKQ1 1148 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 STPG1Q5TH74 334 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 PPP1R2P3Q6NXS1 205 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF613Q6PF04 617 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 VITQ6UXI7 678 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 KIF6Q6ZMV9 814 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 MACC1Q6ZN28 852 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 RTL4Q6ZR62 310 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 RGS9BPQ6ZS82 235 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 AKAP14Q86UN6 197 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 UNC5CLQ8IV45 518 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 TUSC5Q8IXB3 177 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 MCOLN2Q8IZK6 566 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 C17orf47Q8NEP4 570 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 OR13C3Q8NGS6 347 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 PSMA8Q8TAA3 256 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SPATA20Q8TB22 786 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 DQX1Q8TE96 717 aaKnown RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 RAPGEF5Q92565 580 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 NTAN1Q96AB6 310 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF707Q96C28 371 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 INPP4AQ96PE3 977 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 PRAM1Q96QH2 718 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 PARLQ9H300 379 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 CUEDC2Q9H467 287 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 MRPS30Q9NP92 439 aaKnown RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 TBC1D13Q9NVG8 400 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 DBF4Q9UBU7 674 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ERVK-19Q9WJR5 959 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 MRPS2Q9Y399 296 aaKnown RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 GMPPBQ9Y5P6 360 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 PDS5BQ9NTI5 1447 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 TMEM131LA2VDJ0 1609 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 IQCMA0A1B0GVH7 501 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 ANKDD1BA6NHY2 528 aa1.48□□□□□ -2.17
HIF1A-212ENST00000557538 NCF1BA6NI72 391 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-212ENST00000557538 SHISA7A6NL88 538 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms