RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 ITPR2Q14571 2701 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 SHANK1Q9Y566 2161 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 SVILO95425 2214 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 LRBAP50851 2863 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 TACC2O95359 2948 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 SCN3AQ9NY46 2000 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 A0A0A6YYD5 115 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 C2orf92A0A1B0GVN3 265 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 A0A1W2PR48 441 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 C1orf226A1L170 272 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 SLC22A31A6NKX4 558 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 A8MT66 165 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ALG1L2C9J202 215 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 E9PLN8 166 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 TP53I11O14683 189 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 PRKNO60260 465 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 PDE9AO76083 593 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ESRRBO95718 433 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 TPOP07202 933 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 HSD3B1P14060 373 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 KRT15P19012 456 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 IMPDH1P20839 514 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ATP5F1P24539 256 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 HMOX2P30519 316 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 HSD17B3P37058 310 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 DCTP40126 519 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 RFC3P40938 356 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 TMED10P49755 219 aaKnown RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 XKP51811 444 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 CDH13P55290 713 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 HNRNPH2P55795 449 aaKnown RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ERVK-8P63133 956 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 KCNJ2P63252 427 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 RPP38P78345 283 aaKnown RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 IGLV3-21P80748 117 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ZNF750Q32MQ0 723 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 PIGGQ5H8A4 983 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 CFAP157Q5JU67 520 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 TMEM211Q6ICI0 200 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 C16orf47Q6ZP98 133 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 Q6ZPB1 254 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ZNF227Q86WZ6 799 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 SIAH3Q8IW03 269 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 SAMD14Q8IZD0 417 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 GBP7Q8N8V2 638 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 FAM13CQ8NE31 585 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 METTL6Q8TCB7 284 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ZNF721Q8TF20 911 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 CA5BP1Q8WTZ4 195 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 VKORC1Q9BQB6 163 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 MRPL1Q9BYD6 325 aaKnown RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 LDAHQ9H6V9 325 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 CNIH4Q9P003 139 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 REV1Q9UBZ9 1251 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 TBK1Q9UHD2 729 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 PCDHB10Q9UN67 800 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ERVK-19Q9WJR5 959 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ZNF835Q9Y2P0 537 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 MEMO1Q9Y316 297 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ZNF780BQ9Y6R6 833 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 A0A1B0GTH9 108 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 GNG14A0A1W2PPG7 69 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 TMEM200CA6NKL6 621 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 H3BQF6 201 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 TMPRSS11DO60235 418 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 DNAJA2O60884 412 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 CRCPO75575 148 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 AIFM1O95831 613 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 IGKV3-11P04433 115 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 PORP16435 677 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-222ENST00000556768 NT5EP21589 574 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 HTR1EP28566 365 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 TRAF3Q13114 568 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 SLC10A1Q14973 349 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 WIPI1Q5MNZ9 446 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-222ENST00000556768 UBAP2Q5T6F2 1119 aaKnown RBP6.77□□□□□ -1.33
SCFD1-222ENST00000556768 FOXB2Q5VYV0 432 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF787Q6DD87 383 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 GPRIN3Q6ZVF9 776 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 NLRC3Q7RTR2 1065 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 COMMD6Q7Z4G1 85 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 DOLPP1Q86YN1 238 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 METTL4Q8N3J2 472 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF321PQ8N8H1 164 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 CDYL2Q8N8U2 506 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 CCDC63Q8NA47 563 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 OR2M7Q8NG81 312 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF483Q8TF39 744 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-222ENST00000556768 UBLCP1Q8WVY7 318 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-222ENST00000556768 ITLN2Q8WWU7 325 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-222ENST00000556768 KISS1RQ969F8 398 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-222ENST00000556768 DOCK10Q96BY6 2186 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 C1QTNF3Q9BXJ4 246 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 DEFB127Q9H1M4 99 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 TP63Q9H3D4 680 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-222ENST00000556768 EXO5Q9H790 373 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 CXorf21Q9HAI6 301 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 ZBTB26Q9HCK0 441 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 B4GALT7Q9UBV7 327 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms