RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SPIBQ01892 262 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 IRF8Q02556 426 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ACSM2AQ08AH3 577 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 RAPSNQ13702 412 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 KCNC3Q14003 757 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 IHHQ14623 411 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SPCS2Q15005 226 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 MAD2L1BPQ15013 274 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 KIAA0040Q15053 153 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ANGPT1Q15389 498 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 TBCEQ15813 527 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 NPTX1Q15818 432 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 UGT8Q16880 541 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF181Q2M3W8 571 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 TRIM71Q2Q1W2 868 aaKnown RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CTU2Q2VPK5 515 aaKnown RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF284Q2VY69 593 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 C18orf21Q32NC0 220 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF404Q494X3 552 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ANKDD1AQ495B1 522 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 GTDC1Q4AE62 458 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 FBXO43Q4G163 708 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SETMARQ53H47 684 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SPIN4Q56A73 249 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PLEKHS1Q5SXH7 462 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 LIPJQ5W064 366 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ACSM2BQ68CK6 577 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 XAF1Q6GPH4 301 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CXorf57Q6NSI4 855 aaKnown RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PLEKHG7Q6ZR37 379 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF621Q6ZSS3 439 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 FAM92BQ6ZTR7 304 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 USP43Q70EL4 1123 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 AHSA2Q719I0 299 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 EIF3MQ7L2H7 374 aaKnown RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF367Q7RTV3 350 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PRSS48Q7RTY5 328 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 RD3Q7Z3Z2 195 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 AKAP14Q86UN6 197 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ANKRD46Q86W74 232 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CALHM3Q86XJ0 350 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 KRT73Q86Y46 540 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SLC30A8Q8IWU4 369 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 TAGAPQ8N103 731 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CBARPQ8N350 705 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 STX19Q8N4C7 294 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 FAM86B1Q8N7N1 296 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF557Q8N988 423 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SCAIQ8N9R8 606 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 FAM98AQ8NCA5 519 aaKnown RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 C11orf65Q8NCR3 313 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SIMC1Q8NDZ2 872 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 OR4A15Q8NGL6 344 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 OR9Q1Q8NGQ5 310 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 OR6K2Q8NGY2 324 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SPPL2AQ8TCT8 520 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 FAR1Q8WVX9 515 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PROX1Q92786 737 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SLC38A4Q969I6 547 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 TBC1D20Q96BZ9 403 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CXorf40BQ96DE9 158 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 MTFMTQ96DP5 389 aaKnown RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 VMP1Q96GC9 406 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SH3YL1Q96HL8 342 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 METTL2AQ96IZ6 378 aaKnown RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 TPD52L3Q96J77 140 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 B3GALT6Q96L58 329 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 APOLD1Q96LR9 279 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 EPYCQ99645 322 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PITX2Q99697 317 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 COPS4Q9BT78 406 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PHF7Q9BWX1 381 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 EBPLQ9BY08 206 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 MROQ9BYG7 248 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ACPTQ9BZG2 426 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 AMBRA1Q9C0C7 1298 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 EHD1Q9H4M9 534 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ACTL8Q9H568 366 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 IFT22Q9H7X7 185 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 BRD9Q9H8M2 597 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CPNE5Q9HCH3 593 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 IL1RAPQ9NPH3 570 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 FBXO8Q9NRD0 319 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PAK1IP1Q9NWT1 392 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ELOVL2Q9NXB9 296 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CCDC59Q9P031 241 aaKnown RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ERVK-18Q9QC07 812 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CRNNQ9UBG3 495 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF282Q9UDV7 671 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF225Q9UK10 706 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 DUSP12Q9UNI6 340 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ANGPT4Q9Y264 503 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 FAM32AQ9Y421 112 aaKnown RBP4.19□□□□□ -1.74
ATXN3-241ENST00000556374 PCDHGB1Q9Y5G3 927 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 ACTL7AQ9Y615 435 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CPQQ9Y646 472 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SCN8AQ9UQD0 1980 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 FRYLO94915 3013 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 SPEGQ15772 3267 aa4.19□□□□□ -1.74
ATXN3-241ENST00000556374 CNOT1A5YKK6 2376 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms