RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 AP2B1P63010 937 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 PSPHP78330 225 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 LIPEQ05469 1076 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 RBBP4Q09028 425 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 BNIP2Q12982 314 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 COL9A2Q14055 689 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-218ENST00000556343 ZNF267Q14586 743 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-218ENST00000556343 SSPNQ14714 243 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 PRSS53Q2L4Q9 553 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 SPRED3Q2MJR0 410 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 PRICKLE4Q2TBC4 344 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 ZNF750Q32MQ0 723 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 ZNF628Q5EBL2 1059 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 ATAD3BQ5T9A4 648 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 HLA-DQA1Q5Y7H0 255 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 SAXO2Q658L1 398 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 C8orf82Q6P1X6 216 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-218ENST00000556343 SERPINA11Q86U17 422 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 SLC15A3Q8IY34 581 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 VWA5B2Q8N398 1253 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 KIF2BQ8N4N8 673 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 IL22RA1Q8N6P7 574 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 ENDOVQ8N8Q3 282 aaKnown RBP8.62□□□□□ -1.03
ACTN1-218ENST00000556343 ADCY4Q8NFM4 1077 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 OR2Y1Q8NGV0 311 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 SUN3Q8TAQ9 357 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 CT55Q8WUE5 264 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 KAT2AQ92830 837 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 PPWD1Q96BP3 646 aaKnown RBP8.62□□□□□ -1.03
ACTN1-218ENST00000556343 IP6K3Q96PC2 410 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 MS4A4EQ96PG1 132 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 LPAR4Q99677 370 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 CNPPD1Q9BV87 410 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 ACTRT3Q9BYD9 372 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 SPRY4Q9C004 299 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 MUC13Q9H3R2 512 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 CACYBPQ9HB71 228 aaKnown RBP8.62□□□□□ -1.03
ACTN1-218ENST00000556343 SLAMF7Q9NQ25 335 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 EXD2Q9NVH0 621 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 SLC25A37Q9NYZ2 338 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 FOXJ2Q9P0K8 574 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 NTMQ9P121 344 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 ABCD2Q9UBJ2 740 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 CNOT1A5YKK6 2376 aaKnown RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 MYOCOSA0A1B0GUC4 107 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 OR6C76A6NM76 312 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 A8MUA0 341 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 CDRT15L2A8MXV6 281 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 C5orf58C9J3I9 102 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 H0YHG0 523 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 FXYD1O00168 92 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 UPK1AO00322 258 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 PEX12O00623 359 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 RECKO95980 971 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 ICAM2P13598 275 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 HSD17B1P14061 328 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 HTR1EP28566 365 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 PTPN6P29350 595 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 DLSTP36957 453 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 STAT5AP42229 794 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 MTPNP58546 118 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 DCAF7P61962 342 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 TRAP1Q12931 704 aaKnown RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 FOXC1Q12948 553 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 DNASE1L3Q13609 305 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 RTP5Q14D33 572 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 RGNQ15493 299 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 CYP51A1Q16850 503 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 ZNF630Q2M218 657 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 SFT2D3Q587I9 215 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 GCNT6Q5T4J0 391 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 INTS11Q5TA45 600 aaKnown RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 FAAH2Q6GMR7 532 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 FAM199XQ6PEV8 388 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 TMEM205Q6UW68 189 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 FAM198BQ6UWH4 519 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 RNF111Q6ZNA4 994 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 SHISA6Q6ZSJ9 500 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 CPEB2Q7Z5Q1 589 aaKnown RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 ANKRD37Q7Z713 158 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 LAPTM4BQ86VI4 370 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 PROSER1Q86XN7 944 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 RNF130Q86XS8 419 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 RAB43Q86YS6 212 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 ULK2Q8IYT8 1036 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 OR2L13Q8N349 312 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 METTL25Q8N6Q8 603 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 CDRT4Q8N9R6 151 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 OR2T12Q8NG77 320 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 OR10A6Q8NH74 314 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 OR5AK3PQ8NH89 298 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 FBXO27Q8NI29 283 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 ADAMTS15Q8TE58 950 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 TSLPQ969D9 159 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 PMEPA1Q969W9 287 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 CTHRC1Q96CG8 243 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 RNF31Q96EP0 1072 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 REXO5Q96IC2 774 aaKnown RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 FBXL20Q96IG2 436 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms