RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 KIR3DP1A8MWS1 328 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 MYO1GB0I1T2 1018 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 TCP11X1B4DZS4 312 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 G3V3Y1 287 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 SLC25A12O75746 678 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 ATP1B1P05026 303 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 SP1P08047 785 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 EFNA1P20827 205 aaPredicted RBP11.43□□□□□ -0.58
SYNE2-214ENST00000554928 MST1P26927 711 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 CYB561P49447 251 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 RPL14P50914 215 aaKnown RBP11.43□□□□□ -0.58
SYNE2-214ENST00000554928 SSR4P51571 173 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 MAP4K2Q12851 820 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 BIKQ13323 160 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 MRPL49Q13405 166 aaKnown RBP11.43□□□□□ -0.58
SYNE2-214ENST00000554928 HEPACAMQ14CZ8 416 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 CEBPEQ15744 281 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 NNATQ16517 81 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 IL20RBQ6UXL0 311 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 GALNTL5Q7Z4T8 443 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 VWA5B2Q8N398 1253 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 LIX1Q8N485 282 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 ZNF441Q8N8Z8 693 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 OR7G2Q8NG99 324 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 OR8K3Q8NH51 312 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 C16orf52Q8NHV5 167 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 CIDECQ96AQ7 238 aaPredicted RBP11.43□□□□□ -0.58
SYNE2-214ENST00000554928 CTHRC1Q96CG8 243 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 TUBGCP3Q96CW5 907 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 BARD1Q99728 777 aaKnown RBP11.43□□□□□ -0.58
SYNE2-214ENST00000554928 CCT7Q99832 543 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 NUF2Q9BZD4 464 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 WWTR1Q9GZV5 400 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 OR10A5Q9H207 317 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 GLIPR2Q9H4G4 154 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 AKTIPQ9H8T0 292 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 VIPAS39Q9H9C1 493 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 DEPPQ9NTK1 212 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 ABI3Q9P2A4 366 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 COPS7AQ9UBW8 275 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 MARCOQ9UEW3 520 aaPredicted RBP11.43□□□□□ -0.58
SYNE2-214ENST00000554928 YARS2Q9Y2Z4 477 aaKnown RBP11.43□□□□□ -0.58
SYNE2-214ENST00000554928 COPG1Q9Y678 874 aaKnown RBP11.43□□□□□ -0.58
SYNE2-214ENST00000554928 ZNF780BQ9Y6R6 833 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 PINLYPA6NC86 204 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 FCHO1O14526 889 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 ZIC2O95409 532 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-214ENST00000554928 KITP10721 976 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 GPX3P22352 226 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 GNLYP22749 145 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 RFC3P40938 356 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 NR0B1P51843 470 aaKnown RBP11.42□□□□□ -0.58
SYNE2-214ENST00000554928 GPR85P60893 370 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 OCRLQ01968 901 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 PTGR1Q14914 329 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 PIGGQ5H8A4 983 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 RNFT1Q5M7Z0 435 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 FHL5Q5TD97 284 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 IL23RQ5VWK5 629 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 ZNF324BQ6AW86 544 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-214ENST00000554928 DESI1Q6ICB0 168 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 SLC25A25Q6KCM7 469 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 RPUSD3Q6P087 351 aaKnown RBP11.42□□□□□ -0.58
SYNE2-214ENST00000554928 ZNF551Q7Z340 670 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-214ENST00000554928 MAVSQ7Z434 540 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-214ENST00000554928 CYP4Z2PQ8N1L4 340 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 TMEM156Q8N614 296 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 KRTCAP2Q8N6L1 136 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 OR52R1Q8NGF1 315 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 NUBPLQ8TB37 319 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 ZNF75CPQ92670 426 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-214ENST00000554928 ADIPOR1Q96A54 375 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 METTL2AQ96IZ6 378 aaKnown RBP11.42□□□□□ -0.58
SYNE2-214ENST00000554928 ART5Q96L15 291 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 PPP3R2Q96LZ3 170 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 ITPAQ9BY32 194 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 MANSC1Q9H8J5 431 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 EHD3Q9NZN3 535 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 BCAP29Q9UHQ4 241 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 PSME2Q9UL46 239 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 ENTPD4Q9Y227 616 aa11.42□□□□□ -0.58
SYNE2-214ENST00000554928 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-214ENST00000554928 HELZ2Q9BYK8 2649 aaKnown RBP11.41□□□□□ -0.58
SYNE2-214ENST00000554928 UQCRHLA0A096LP55 91 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 SDHDO14521 159 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 ZNHIT1O43257 154 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 DYRK3O43781 588 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 NME2P1O60361 137 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 WISP1O95388 367 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 NME2P22392 152 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 EMDP50402 254 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 NCBP2P52298 156 aaKnown RBP eCLIP11.41□□□□□ -0.58
SYNE2-214ENST00000554928 DIO3P55073 304 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 PDE7AQ13946 482 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 MAPKAPK3Q16644 382 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 ATP6AP1LQ52LC2 224 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 IKBIPQ70UQ0 350 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 SLC29A4Q7RTT9 530 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 PRR22Q8IZ63 422 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms