RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 BCAS1O75363 584 aaPredicted RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 STC2O76061 302 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 CD8BP10966 210 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 HLA-EP13747 358 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 AGXTP21549 392 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 CCND3P30281 292 aaPredicted RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 CDK5R2Q13319 367 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 RIN1Q13671 783 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 PRRT3Q5FWE3 981 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ARHGAP11AQ6P4F7 1023 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 BORAQ6PGQ7 559 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 SERINC5Q86VE9 423 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ARNTL2Q8WYA1 636 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 HYLS1Q96M11 299 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 TMEM68Q96MH6 324 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ACOT13Q9NPJ3 140 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ENPP5Q9UJA9 477 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ENPP4Q9Y6X5 453 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ZNF142P52746 1687 aaPredicted RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ANHXE9PGG2 379 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ETFAP13804 333 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 PFKLP17858 780 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 HTR2BP41595 481 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ID2Q02363 134 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 OC90Q02509 493 aaPredicted RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 GAS6Q14393 721 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 EIF4HQ15056 248 aaKnown RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ZNF584Q8IVC4 421 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 CLECL1Q8IZS7 167 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 SLC22A8Q8TCC7 542 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 SCGB1C1Q8TD33 95 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 FRS2Q8WU20 508 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 MTG2Q9H4K7 406 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 AGPAT4Q9NRZ5 378 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 WASF3Q9UPY6 502 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 OSMP13725 252 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 FRKP42685 505 aaPredicted RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 MTNR1AP48039 350 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 STK19P49842 368 aaPredicted RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ITPRIPL2Q3MIP1 535 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ARHGAP40Q5TG30 622 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 METTL2BQ6P1Q9 378 aaKnown RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 C1orf94Q6P1W5 598 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 PM20D2Q8IYS1 436 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 LRRC25Q8N386 305 aaPredicted RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 OR6N1Q8NGY5 312 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 UTP4Q969X6 686 aaKnown RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 SYT17Q9BSW7 474 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 MYNNQ9NPC7 610 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 BAZ2AQ9UIF9 1905 aaKnown RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 GNRHRP30968 328 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 GABRA3P34903 492 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 PAGE3Q5JUK9 113 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 TEX26Q8N6G2 289 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 OR4C15Q8NGM1 316 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 CHFRQ96EP1 664 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 SLC30A3Q99726 388 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 SMG9Q9H0W8 520 aaKnown RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 PPIL3Q9H2H8 161 aaKnown RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 MVB12BQ9H7P6 319 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 SPHK2Q9NRA0 654 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 COL2A1P02458 1487 aaPredicted RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 A0A1W2PPK0 400 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 GPX3P22352 226 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 TBC1D25Q3MII6 688 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 OR51A7Q8NH64 312 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 PTERQ96BW5 349 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 TEPSINQ96N21 525 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 NECAB3Q96P71 396 aaPredicted RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 TREX2Q9BQ50 279 aaPredicted RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 FAM83CQ9BQN1 747 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 SLC12A9Q9BXP2 914 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 LRP6O75581 1613 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 B8ZZF3 427 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 FGF18O76093 207 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 OPRL1P41146 370 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 FPGSQ05932 587 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 MICAQ29983 383 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 EOGTQ5NDL2 527 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 ADGRG5Q8IZF4 528 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 F2RL3Q96RI0 385 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 C2orf74A8MZ97 194 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 C9J4A7 227 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 H7C417 338 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 SOX1O00570 391 aaPredicted RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 CREBL2O60519 120 aaPredicted RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 CSTAP01040 98 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 ZNF41P51814 821 aaPredicted RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 NKX2-5P52952 324 aaPredicted RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 OR52E8Q6IFG1 317 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 SLC16A9Q7RTY1 509 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 ZSCAN1Q8NBB4 408 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 TBC1D15Q8TC07 691 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 BORCS8Q96FH0 119 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 TMEM19Q96HH6 336 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 MROQ9BYG7 248 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 LTBP3Q9NS15 1303 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 JRKO75564 520 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 UPK1BO75841 260 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms