RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 TSEN54Q7Z6J9 526 aaKnown RBP11.04□□□□□ -0.64
SHMT2-212ENST00000554467 CCDC116Q8IYX3 515 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 FAM83FQ8NEG4 500 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-212ENST00000554467 DDX31Q9H8H2 851 aaKnown RBP11.04□□□□□ -0.64
SHMT2-212ENST00000554467 SP140LQ9H930 580 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 ABCB10Q9NRK6 738 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 TMEM74BQ9NUR3 256 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 ADPRHL2Q9NX46 363 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 TAF4O00268 1085 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 THEGLP0DJG4 465 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 IL1RNP18510 177 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 RRM2P31350 389 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 DAPP51397 102 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 NCBP2P52298 156 aaKnown RBP eCLIP11.04□□□□□ -0.64
SHMT2-212ENST00000554467 DGKEP52429 567 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 CD47Q08722 323 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 GANABQ14697 944 aaKnown RBP11.04□□□□□ -0.64
SHMT2-212ENST00000554467 GPR19Q15760 415 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 ABHD17CQ6PCB6 329 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 C6orf120Q7Z4R8 191 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 VN1R4Q7Z5H5 301 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 TAF8Q7Z7C8 310 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 C7orf34Q96L11 122 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 SLC6A18Q96N87 628 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 RBM4BQ9BQ04 359 aaKnown RBP11.04□□□□□ -0.64
SHMT2-212ENST00000554467 RBM4Q9BWF3 364 aaKnown RBP11.04□□□□□ -0.64
SHMT2-212ENST00000554467 GLIPR2Q9H4G4 154 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 PRDM7Q9NQW5 492 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 PLSCR3Q9NRY6 295 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 STARD5Q9NSY2 213 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 SIRT3Q9NTG7 399 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-212ENST00000554467 CORO2BQ9UQ03 480 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 SPAG17Q6Q759 2223 aa11.04□□□□□ -0.64
SHMT2-212ENST00000554467 LOC105369274A0A096LPK9 316 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 LOC102723532A0A0G2JNH3 316 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 A6NCN8 305 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 ERVH48-1M5A8F1 160 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 SOX1O00570 391 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 P2RX6O15547 441 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 SEMG1P04279 462 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 ZNF888P0CJ79 500 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 PCSK2P16519 638 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 HIST1H1TP22492 207 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 IGFBP5P24593 272 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 ATP5A1P25705 553 aaKnown RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 PSMB9P28065 219 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 DSTNP60981 165 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 SLC9A5Q14940 896 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 FBXO43Q4G163 708 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 Q6ZPB1 254 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 OR4N5Q8IXE1 308 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 OR4N4Q8N0Y3 316 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 DENND6BQ8NEG7 585 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 MTERF3Q96E29 417 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 BBS4Q96RK4 519 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 RHNO1Q9BSD3 238 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 PHF7Q9BWX1 381 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 RSPO3Q9BXY4 272 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 SERHL2Q9H4I8 314 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 EQTNQ9NQ60 294 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 C8orf4Q9NR00 106 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 OR6C2Q9NZP2 312 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 TRPC4Q9UBN4 977 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 HEBP2Q9Y5Z4 205 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 IDH3BO43837 385 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 SSX4O60224 188 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 AIFM1O95831 613 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 VIPP01282 170 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 UGT2B7P16662 529 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 UQCRC2P22695 453 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 ZIC1Q15915 447 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 DUSP7Q16829 419 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 Q5BKY6 102 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 FRMPD2BQ6IN97 320 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 SVOPLQ8N434 492 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 CELF2-AS1Q8N7Q2 184 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 ATG16L2Q8NAA4 619 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 RHOXF1Q8NHV9 184 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 DYNC2LI1Q8TCX1 351 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 QRFPRQ96P65 431 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 MAPKAP1Q9BPZ7 522 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 DOHHQ9BU89 302 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 B3GNT4Q9C0J1 378 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 POLMQ9NP87 494 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 THUMPD1Q9NXG2 353 aaKnown RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 QPCTLQ9NXS2 382 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 USP36Q9P275 1121 aaKnown RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 KIF17Q9P2E2 1029 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 UPK1BO75841 260 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 OR12D1P0DN82 309 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 MAP2K4P45985 399 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 LSSP48449 732 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 CCT3P49368 545 aaKnown RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 PCBP4P57723 403 aaKnown RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 SELENOWP63302 87 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 EIF2B5Q13144 721 aaKnown RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 IQCCQ4KMZ1 466 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 DEFB134Q4QY38 66 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 TTC23Q5W5X9 447 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 ZNF425Q6IV72 752 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms