RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 RFC3P40938 356 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 GSTM5P46439 218 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 CCT5P48643 541 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 XKP51811 444 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 DNAJB13P59910 316 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 PPIAP62937 165 aaKnown RBP9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 ADORA2A-AS1P86434 159 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 HSF1Q00613 529 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 PLGLB1Q02325 96 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 FOXO1Q12778 655 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 NTRK2Q16620 822 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 ZNF750Q32MQ0 723 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 SPIN4Q56A73 249 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 C6orf163Q5TEZ5 329 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 GALNT18Q6P9A2 607 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 FAM47EQ6ZV65 393 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 DOLPP1Q86YN1 238 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 TAGAPQ8N103 731 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 FBXW8Q8N3Y1 598 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 FAM109AQ8N4B1 249 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 C1orf52Q8N6N3 182 aaKnown RBP9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 ZNF615Q8N8J6 731 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 FAM57AQ8TBR7 257 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 AGAP11Q8TF27 550 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 CHTF18Q8WVB6 975 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 UCN3Q969E3 161 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 TM4SF18Q96CE8 201 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 GAL3ST4Q96RP7 486 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 TTTY12Q9BZ98 90 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 ACPTQ9BZG2 426 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 SHCBP1LQ9BZQ2 653 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 IL1RL2Q9HB29 575 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 SIRT5Q9NXA8 310 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 CNIH4Q9P003 139 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 MCM8Q9UJA3 840 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 SH3BGRL2Q9UJC5 107 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 GRID1Q9ULK0 1009 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 NCKAP5O14513 1909 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 POLQO75417 2590 aa9.6□□□□□ -0.87
PTCD2P1-201ENST00000554393 FREM3P0C091 2139 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 A0A0G2JMM0 328 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 A0A1B0GTH9 108 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 C2orf92A0A1B0GVN3 265 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 A0A1W2PPB8 328 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 A0A1W2PRS3 328 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 ANKRD33BA6NCL7 494 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 OR14I1A6ND48 311 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 KIR3DP1A8MWS1 328 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 CAPN14A8MX76 684 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 PRSS44E7EML9 344 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 HNRNPRO43390 633 aaKnown RBP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 CDC40O60508 579 aaKnown RBP eCLIP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 PLIN3O60664 434 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 IGHG3P01860 377 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 CCL3P10147 92 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 DRD2P14416 443 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 CSNK2A2P19784 350 aaPredicted RBP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 SSTR4P31391 388 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 DEKP35659 375 aaKnown RBP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 TMED10P49755 219 aaKnown RBP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 ACSM2AQ08AH3 577 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 MAP4K2Q12851 820 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 PRICKLE4Q2TBC4 344 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 TCHHL1Q5QJ38 904 aaPredicted RBP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 TBCELQ5QJ74 424 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 HLA-DQA1Q5Y7H0 255 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 SLC22A10Q63ZE4 541 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 ACSM2BQ68CK6 577 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 ZNF787Q6DD87 383 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 FRMD7Q6ZUT3 714 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 SAMD14Q8IZD0 417 aaPredicted RBP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 VWA5B2Q8N398 1253 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 RIBC1Q8N443 379 aaPredicted RBP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 OR52N2Q8NGI0 321 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 SREK1Q8WXA9 508 aaKnown RBP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 C11orf24Q96F05 449 aaPredicted RBP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 DMRTA2Q96SC8 542 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 SECISBP2Q96T21 854 aaKnown RBP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 HBEGFQ99075 208 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 OR10A5Q9H207 317 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 CHST11Q9NPF2 352 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 MKS1Q9NXB0 559 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 MID2Q9UJV3 735 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 BOKQ9UMX3 212 aaPredicted RBP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 CFL2Q9Y281 166 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 CHCHD2Q9Y6H1 151 aaPredicted RBP9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 ARHGAP21Q5T5U3 1957 aa9.59□□□□□ -0.87
PTCD2P1-201ENST00000554393 A0A1B0GVC2 190 aa9.58□□□□□ -0.88
PTCD2P1-201ENST00000554393 A0A1W2PS29 197 aa9.58□□□□□ -0.88
PTCD2P1-201ENST00000554393 FAM166BA8MTA8 275 aa9.58□□□□□ -0.88
PTCD2P1-201ENST00000554393 COPEO14579 308 aa9.58□□□□□ -0.88
PTCD2P1-201ENST00000554393 ADAM10O14672 748 aa9.58□□□□□ -0.88
PTCD2P1-201ENST00000554393 PCDH7O60245 1069 aa9.58□□□□□ -0.88
PTCD2P1-201ENST00000554393 SUSD5O60279 629 aa9.58□□□□□ -0.88
PTCD2P1-201ENST00000554393 TPOP07202 933 aa9.58□□□□□ -0.88
PTCD2P1-201ENST00000554393 NUDT17P0C025 328 aa9.58□□□□□ -0.88
PTCD2P1-201ENST00000554393 CT62P0C5K7 136 aa9.58□□□□□ -0.88
PTCD2P1-201ENST00000554393 S1PR1P21453 382 aa9.58□□□□□ -0.88
PTCD2P1-201ENST00000554393 NT5EP21589 574 aa9.58□□□□□ -0.88
PTCD2P1-201ENST00000554393 TIA1P31483 386 aaKnown RBP eCLIP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms