RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 DNAJC22Q8N4W6 341 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 WDTC1Q8N5D0 677 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 SLC5A11Q8WWX8 675 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 NKD1Q969G9 470 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 C7orf34Q96L11 122 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 MRGPRX2Q96LB1 330 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 URM1Q9BTM9 101 aaKnown RBP12.23□□□□□ -0.45
PTCH1-212ENST00000546744 CTPS2Q9NRF8 586 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 GPRC5BQ9NZH0 403 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 DLGAP4Q9Y2H0 992 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 SCN9AQ15858 1988 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 ZNF878C9JN71 531 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 ADAM10O14672 748 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 NPC1O15118 1278 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 AMD1P17707 334 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 PYCR1P32322 319 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 ASAH1Q13510 395 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 OPCMLQ14982 345 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 TARBP2Q15633 366 aaKnown RBP12.23□□□□□ -0.45
PTCH1-212ENST00000546744 KRBOX4Q5JUW0 171 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 GAREM2Q75VX8 874 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 NLRP8Q86W28 1048 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 CASTOR1Q8WTX7 329 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 NT5C3BQ969T7 300 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 ISL2Q96A47 359 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 SUV39H2Q9H5I1 410 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 KCNJ16Q9NPI9 418 aa12.23□□□□□ -0.45
PTCH1-212ENST00000546744 SEPT4O43236 478 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 KDELR3O43731 214 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 MITFO75030 526 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-212ENST00000546744 MMP3P08254 477 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 ARSBP15848 533 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 UGT2B7P16662 529 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 S1PR1P21453 382 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 SF3B4Q15427 424 aaKnown RBP eCLIP12.22□□□□□ -0.45
PTCH1-212ENST00000546744 CBLL1Q75N03 491 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 OR5AK3PQ8NH89 298 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 NPLOC4Q8TAT6 608 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 NSMAFQ92636 917 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 COQ8BQ96D53 544 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 NAA50Q9GZZ1 169 aaKnown RBP12.22□□□□□ -0.45
PTCH1-212ENST00000546744 GOLGA2P5Q9HBQ8 144 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 FANCFQ9NPI8 374 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 PPP4R1LQ9P1A2 415 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 FBXW2Q9UKT8 454 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 POLHQ9Y253 713 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 HS3ST4Q9Y661 456 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 P2RX6O15547 441 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 NARSO43776 548 aaKnown RBP12.22□□□□□ -0.45
PTCH1-212ENST00000546744 SSX4O60224 188 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 TGFB1P01137 390 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 ALDOBP05062 364 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 HRH2P25021 359 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 PRSS3P35030 304 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 PSMD8P48556 350 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 ARF3P61204 181 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-212ENST00000546744 ARF1P84077 181 aaKnown RBP12.22□□□□□ -0.45
PTCH1-212ENST00000546744 RANBP10Q6VN20 620 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 SLC51BQ86UW2 128 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 KLBQ86Z14 1044 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 B3GNT7Q8NFL0 401 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 OR10Q1Q8NGQ4 319 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 NSUN5Q96P11 429 aaKnown RBP12.22□□□□□ -0.45
PTCH1-212ENST00000546744 RSPH9Q9H1X1 276 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-212ENST00000546744 TMEM39AQ9NV64 488 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 SAGE1Q9NXZ1 904 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 FBXO10Q9UK96 956 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 RIPK3Q9Y572 518 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 MRPL42Q9Y6G3 142 aaKnown RBP12.22□□□□□ -0.45
PTCH1-212ENST00000546744 ADAM12O43184 909 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 CTSEP14091 401 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 GGT5P36269 586 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 ETV3P41162 512 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 WDR5P61964 334 aaKnown RBP12.22□□□□□ -0.45
PTCH1-212ENST00000546744 RING1Q06587 406 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 ZNF252P-AS1Q0IIN9 211 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 ILF3Q12906 894 aaKnown RBP eCLIP12.22□□□□□ -0.45
PTCH1-212ENST00000546744 MEF2DQ14814 521 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 PAGE3Q5JUK9 113 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 CLVS2Q5SYC1 327 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 AVPI1Q5T686 147 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 LINGO4Q6UY18 593 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 AMZ2Q86W34 360 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 NETO1Q8TDF5 533 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 WFIKKN2Q8TEU8 576 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 PGAP3Q96FM1 320 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-212ENST00000546744 HDHD5Q9BXW7 423 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 SLC2A11Q9BYW1 496 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 RDH14Q9HBH5 336 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 PSORS1C1Q9UIG5 152 aa12.22□□□□□ -0.45
PTCH1-212ENST00000546744 SCAMP2O15127 329 aaKnown RBP12.21□□□□□ -0.45
PTCH1-212ENST00000546744 ZNF208O43345 1280 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 CH25HO95992 272 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 ADH1AP07327 375 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 MAN2A2P49641 1150 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 UBXN11Q5T124 520 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 SLC24A5Q71RS6 500 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 OR4K5Q8NGD3 323 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 FAM110BQ8TC76 370 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 BRIX1Q8TDN6 353 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms