RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.28□□□□□ -1.08
TDP1-204ENST00000545686 ANHXE9PGG2 379 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 LYRM1O43325 122 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 PI15O43692 258 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 ORC5O43913 435 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 SH3BP5O60239 455 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 CSF2P04141 144 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 CCNYL3P0C7X3 344 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 GALP22466 123 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 MMP11P24347 488 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 MANFP55145 182 aaKnown RBP8.28□□□□□ -1.08
TDP1-204ENST00000545686 P2RX3P56373 397 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 PCBP4P57723 403 aaKnown RBP8.28□□□□□ -1.08
TDP1-204ENST00000545686 MLC1Q15049 377 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 TCTN1Q2MV58 587 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 CRTC2Q53ET0 693 aaPredicted RBP8.28□□□□□ -1.08
TDP1-204ENST00000545686 FAM209AQ5JX71 171 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 MZT2AQ6P582 158 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 CNIH2Q6PI25 160 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 LCTLQ6UWM7 567 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 C6orf120Q7Z4R8 191 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 BCDIN3DQ7Z5W3 292 aaKnown RBP8.28□□□□□ -1.08
TDP1-204ENST00000545686 TRIM48Q8IWZ4 208 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 TBC1D19Q8N5T2 526 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 IQCF1Q8N6M8 205 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 OR4K5Q8NGD3 323 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 OR4D11Q8NGI4 311 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 HCAR2Q8TDS4 363 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 SMPDL3AQ92484 453 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 TM9SF4Q92544 642 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 NR4A3Q92570 626 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 C1GALT1C1Q96EU7 318 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 RNFT2Q96EX2 444 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 QRFPRQ96P65 431 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 KCNJ15Q99712 375 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 ARHGAP9Q9BRR9 750 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 TMEM43Q9BTV4 400 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 SPATA5L1Q9BVQ7 753 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 FNDC11Q9BVV2 318 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 RSPO3Q9BXY4 272 aaPredicted RBP8.28□□□□□ -1.08
TDP1-204ENST00000545686 IRF2BPLQ9H1B7 796 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 SPNS1Q9H2V7 528 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 RHBGQ9H310 441 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 SLAMF7Q9NQ25 335 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 SIRT3Q9NTG7 399 aaPredicted RBP8.28□□□□□ -1.08
TDP1-204ENST00000545686 FBXW2Q9UKT8 454 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 POLHQ9Y253 713 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 SLC9A8Q9Y2E8 581 aa8.28□□□□□ -1.08
TDP1-204ENST00000545686 KDM4EB2RXH2 506 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 LEFTY2O00292 366 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 SLC28A2O43868 658 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 FHP07954 510 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 PSKH1P11801 424 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 TIMP2P16035 220 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 PPP2R1BP30154 601 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 PKLRP30613 574 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 MMP12P39900 470 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 HTR2BP41595 481 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 MAN2A2P49641 1150 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 MAPK12P53778 367 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 RRAS2P62070 204 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 RPS26P62854 115 aaKnown RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 FABP5Q01469 135 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 ACSM1Q08AH1 577 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 DSG2Q14126 1118 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 PRAMEF14Q5SWL7 426 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 IER5LQ5T953 404 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 PRAMEF13Q5VWM6 474 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 FAM83HQ6ZRV2 1179 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 GAREM2Q75VX8 874 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 PRICKLE2Q7Z3G6 844 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 RBM45Q8IUH3 476 aaKnown RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 CELF5Q8N6W0 485 aaKnown RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 ZNF485Q8NCK3 441 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 MORN4Q8NDC4 146 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 NLGN4YQ8NFZ3 816 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 TMEM203Q969S6 136 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 AP2M1Q96CW1 435 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 ZBED6CLQ96FA7 236 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 PRRC1Q96M27 445 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 TREX2Q9BQ50 279 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 MAN2C1Q9NTJ4 1040 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 ACSS1Q9NUB1 689 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 TAS2R7Q9NYW3 318 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 FAM240BA0A1B0GVZ2 78 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 PLPP1O14494 284 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 CASKO14936 926 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 CHST10O43529 356 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 SLC19A2O60779 497 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 CPNE3O75131 537 aaKnown RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 SOD1P00441 154 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 APEX1P27695 318 aaKnown RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 PBLDP30039 288 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 NUDT1P36639 197 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 MTNR1AP48039 350 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 EVX1P49640 407 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 GPLD1P80108 840 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 FOXD4Q12950 439 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 MAB21L1Q13394 359 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 TSTA3Q13630 321 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms