RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ZNF354AO60765 605 aaPredicted RBP14.52□□□□□ -0.09
CCDC78-216ENST00000544996 SLC19A2O60779 497 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 NADKO95544 446 aaPredicted RBP14.52□□□□□ -0.09
CCDC78-216ENST00000544996 FBXO45P0C2W1 286 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 CNR1P21554 472 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 PRPH2P23942 346 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 MPIP34949 423 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 RFC3P40938 356 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 NR0B1P51843 470 aaKnown RBP14.52□□□□□ -0.09
CCDC78-216ENST00000544996 PLGLB1Q02325 96 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 ZNF791Q3KP31 576 aaPredicted RBP14.52□□□□□ -0.09
CCDC78-216ENST00000544996 RNFT1Q5M7Z0 435 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 SLC22A10Q63ZE4 541 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 FAM180BQ6P0A1 224 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 FAM111BQ6SJ93 734 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 LRIG3Q6UXM1 1119 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 RGS9BPQ6ZS82 235 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 ZCCHC23Q6ZST2 131 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 EXOC3L1Q86VI1 746 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 NUDCD3Q8IVD9 361 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 SIAH3Q8IW03 269 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 DDIASQ8IXT1 998 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 CCDC116Q8IYX3 515 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 GHDCQ8N2G8 530 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 FAM13CQ8NE31 585 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 C17orf47Q8NEP4 570 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 ADCY4Q8NFM4 1077 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 OR2M7Q8NG81 312 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 C16orf52Q8NHV5 167 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 PSMG3-AS1Q96PY0 264 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 BBS4Q96RK4 519 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 FAM173AQ9BQD7 235 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 STMN4Q9H169 189 aaPredicted RBP14.52□□□□□ -0.09
CCDC78-216ENST00000544996 LRTM1Q9HBL6 345 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 MYNNQ9NPC7 610 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 SLC35C2Q9NQQ7 365 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 DEPPQ9NTK1 212 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 MAT2BQ9NZL9 334 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 CCL27Q9Y4X3 112 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 DNAJC15Q9Y5T4 150 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 FLNCQ14315 2725 aa14.52□□□□□ -0.09
CCDC78-216ENST00000544996 NPIPB8E9PQR5 432 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 TM9SF1O15321 606 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 LINC00032P0C843 101 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 CCL3P10147 92 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 S1PR1P21453 382 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 ETV4P43268 484 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 SERPINB4P48594 390 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 TMED10P49755 219 aaKnown RBP14.51□□□□□ -0.09
CCDC78-216ENST00000544996 MGAT2Q10469 447 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 SH2D4BQ5SQS7 431 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 C1QL3Q5VWW1 255 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 IKBIPQ70UQ0 350 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 SLC22A16Q86VW1 577 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 TICAM1Q8IUC6 712 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 ZNF441Q8N8Z8 693 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 TWIST2Q8WVJ9 160 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 RELTQ969Z4 430 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 CTHRC1Q96CG8 243 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 ERP27Q96DN0 273 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 PGM2Q96G03 612 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 KCNK9Q9NPC2 374 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 CNIH4Q9P003 139 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 PRODH2Q9UF12 536 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 ZNF639Q9UID6 485 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 PTGDR2Q9Y5Y4 395 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 ACTL7BQ9Y614 415 aa14.51□□□□□ -0.09
CCDC78-216ENST00000544996 WIPF3A6NGB9 483 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 TMEM233B4DJY2 109 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 G3V3Y1 287 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 TP53I11O14683 189 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 BIRC5O15392 142 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 HS6ST1O60243 411 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 BCAS2O75934 225 aaPredicted RBP14.5□□□□□ -0.09
CCDC78-216ENST00000544996 WISP2O76076 250 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 ZWINTO95229 277 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 LDLRP01130 860 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 ABOP16442 354 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 PTGER1P34995 402 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 PPIAP62937 165 aaKnown RBP14.5□□□□□ -0.09
CCDC78-216ENST00000544996 DUSP2Q05923 314 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 EXOSC7Q15024 291 aaKnown RBP14.5□□□□□ -0.09
CCDC78-216ENST00000544996 KIAA0040Q15053 153 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 LTB4RQ15722 352 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 TRMT12Q53H54 448 aaKnown RBP14.5□□□□□ -0.09
CCDC78-216ENST00000544996 FAM71E1Q6IPT2 247 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 PAOXQ6QHF9 649 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 LYPD8Q6UX82 237 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 Q6ZSR9 355 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 FJX1Q86VR8 437 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 SPPL2CQ8IUH8 684 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 OR5M3Q8NGP4 307 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.5□□□□□ -0.09
CCDC78-216ENST00000544996 AGR3Q8TD06 166 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 ZNF675Q8TD23 568 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 PAQR8Q8TEZ7 354 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 ADIPOR1Q96A54 375 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 TUBB1Q9H4B7 451 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 TAS2R7Q9NYW3 318 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 TMED5Q9Y3A6 229 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms