RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 OR8J2Q8NGG1 315 aa12.67□□□□□ -0.38
SP140-213ENST00000543928 OR9I1Q8NGQ6 314 aa12.67□□□□□ -0.38
SP140-213ENST00000543928 CTHRC1Q96CG8 243 aa12.67□□□□□ -0.38
SP140-213ENST00000543928 DEFB126Q9BYW3 111 aa12.67□□□□□ -0.38
SP140-213ENST00000543928 NSRP1Q9H0G5 558 aaKnown RBP12.67□□□□□ -0.38
SP140-213ENST00000543928 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.67□□□□□ -0.38
SP140-213ENST00000543928 ZNF639Q9UID6 485 aa12.67□□□□□ -0.38
SP140-213ENST00000543928 LHX6Q9UPM6 363 aa12.67□□□□□ -0.38
SP140-213ENST00000543928 TRIM33Q9UPN9 1127 aa12.67□□□□□ -0.38
SP140-213ENST00000543928 PCDHGA9Q9Y5G4 932 aaKnown RBP12.67□□□□□ -0.38
SP140-213ENST00000543928 COPG1Q9Y678 874 aaKnown RBP12.67□□□□□ -0.38
SP140-213ENST00000543928 A0A1W2PRB8 838 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 ERVH48-1M5A8F1 160 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 PRKNO60260 465 aaPredicted RBP12.66□□□□□ -0.38
SP140-213ENST00000543928 ZFAND5O76080 213 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 SLITRK5O94991 958 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 DRD4P21917 467 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 GPX3P22352 226 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 S100A3P33764 101 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 GPC1P35052 558 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 MC3RP41968 323 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 MRPL19P49406 292 aaKnown RBP12.66□□□□□ -0.38
SP140-213ENST00000543928 ATP4BP51164 291 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 DGKQP52824 942 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 WNT3P56703 355 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 SLC37A1P57057 533 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 RNF4P78317 190 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 KCNAB2Q13303 367 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 SQLEQ14534 574 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 CRB2Q5IJ48 1285 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 AGAP7PQ5VUJ5 663 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 FCRLBQ6BAA4 426 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 H3F3CQ6NXT2 135 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 TMEM107Q6UX40 140 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 CPLX4Q7Z7G2 160 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 C9orf40Q8IXQ3 194 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 SLC5A8Q8N695 610 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 SIMC1Q8NDZ2 872 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 OR7G2Q8NG99 324 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 OR7G1Q8NGA0 311 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 THAP3Q8WTV1 239 aaPredicted RBP12.66□□□□□ -0.38
SP140-213ENST00000543928 C10orf82Q8WW14 230 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 ABHD17AQ96GS6 310 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 AGAP4Q96P64 663 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 ELAC2Q9BQ52 826 aaKnown RBP12.66□□□□□ -0.38
SP140-213ENST00000543928 OR10A5Q9H207 317 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 ANKRA2Q9H9E1 313 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 PLSCR2Q9NRY7 297 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 BCAP29Q9UHQ4 241 aa12.66□□□□□ -0.38
SP140-213ENST00000543928 CNTRLQ7Z7A1 2325 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 OR6C76A6NM76 312 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 PLOD2O00469 737 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 CFLARO15519 480 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 PLOD3O60568 738 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 C6orf47O95873 294 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 CBX7O95931 251 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 ALPPP05187 535 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 PGRP06401 933 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 SOX11P35716 441 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 ZFP36L2P47974 494 aaKnown RBP12.65□□□□□ -0.38
SP140-213ENST00000543928 CDK9P50750 372 aaKnown RBP12.65□□□□□ -0.38
SP140-213ENST00000543928 PHC1P78364 1004 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 IRX1P78414 480 aaPredicted RBP12.65□□□□□ -0.38
SP140-213ENST00000543928 DUSP8Q13202 625 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 MLC1Q15049 377 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 FHL5Q5TD97 284 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 ANXA8L1Q5VT79 327 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 METTL21CQ5VZV1 264 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 ISLR2Q6UXK2 745 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 LINC00696Q6ZRV3 163 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 SLC29A4Q7RTT9 530 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 SPATA21Q7Z572 469 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 RPS19BP1Q86WX3 136 aaKnown RBP12.65□□□□□ -0.38
SP140-213ENST00000543928 ZNF615Q8N8J6 731 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 OR52R1Q8NGF1 315 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 OR8K3Q8NH51 312 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 OR5P2Q8WZ92 322 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 ERP27Q96DN0 273 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 ELP4Q96EB1 424 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 MAGED4Q96JG8 741 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 ZNF354BQ96LW1 612 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 GAL3ST4Q96RP7 486 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 SMAD5Q99717 465 aaKnown RBP12.65□□□□□ -0.38
SP140-213ENST00000543928 NPAS2Q99743 824 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 ADNPQ9H2P0 1102 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 RABEP2Q9H5N1 569 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 CDCP1Q9H5V8 836 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 ZNF385DQ9H6B1 395 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 LIN28AQ9H9Z2 209 aaKnown RBP12.65□□□□□ -0.38
SP140-213ENST00000543928 TEKT2Q9UIF3 430 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 TUBD1Q9UJT1 453 aa12.65□□□□□ -0.38
SP140-213ENST00000543928 PIEZO2Q9H5I5 2752 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 KMT2BQ9UMN6 2715 aaPredicted RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 A0A087WV62 115 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 FAM234BA2RU67 622 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 TMEM200CA6NKL6 621 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 K7EM74 188 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 RNASET2O00584 256 aaKnown RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 MAN1A2O60476 641 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 PRAMEF2O60811 474 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms