RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 DSCR3O14972 297 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 B4GALT2O60909 372 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 DXOO77932 396 aaKnown RBP26.05■■□□□ 1.76
CCM2-218ENST00000541586 KLK3P07288 261 aaPredicted RBP26.05■■□□□ 1.76
CCM2-218ENST00000541586 GCGRP47871 477 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 CCT3P49368 545 aaKnown RBP26.05■■□□□ 1.76
CCM2-218ENST00000541586 FADDQ13158 208 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 IGF2-ASQ6U949 168 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 OR4N5Q8IXE1 308 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 SAMD14Q8IZD0 417 aaPredicted RBP26.05■■□□□ 1.76
CCM2-218ENST00000541586 ZDHHC19Q8WVZ1 309 aaPredicted RBP26.05■■□□□ 1.76
CCM2-218ENST00000541586 NCLNQ969V3 563 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 B3GNT4Q9C0J1 378 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 HCN3Q9P1Z3 774 aa26.05■■□□□ 1.76
CCM2-218ENST00000541586 FREM2Q5SZK8 3169 aa26.04■■□□□ 1.76
CCM2-218ENST00000541586 TNFRSF21O75509 655 aa26.04■■□□□ 1.76
CCM2-218ENST00000541586 CREG1O75629 220 aa26.04■■□□□ 1.76
CCM2-218ENST00000541586 PTDSS1P48651 473 aaKnown RBP26.04■■□□□ 1.76
CCM2-218ENST00000541586 XKP51811 444 aa26.04■■□□□ 1.76
CCM2-218ENST00000541586 FAM199XQ6PEV8 388 aaPredicted RBP26.04■■□□□ 1.76
CCM2-218ENST00000541586 C6orf15Q6UXA7 325 aaPredicted RBP26.04■■□□□ 1.76
CCM2-218ENST00000541586 TIPARPQ7Z3E1 657 aaKnown RBP26.04■■□□□ 1.76
CCM2-218ENST00000541586 ADGRG5Q8IZF4 528 aa26.04■■□□□ 1.76
CCM2-218ENST00000541586 YIPF2Q9BWQ6 316 aa26.04■■□□□ 1.76
CCM2-218ENST00000541586 SEMA3GQ9NS98 782 aa26.04■■□□□ 1.76
CCM2-218ENST00000541586 CCM2LQ9NUG4 571 aaPredicted RBP26.04■■□□□ 1.76
CCM2-218ENST00000541586 TMEM184BQ9Y519 407 aaPredicted RBP26.04■■□□□ 1.76
CCM2-218ENST00000541586 AKAP13Q12802 2813 aa26.04■■□□□ 1.76
CCM2-218ENST00000541586 STMND1H3BQB6 276 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 GPIP06744 558 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 PSMA4P25789 261 aaKnown RBP26.03■■□□□ 1.76
CCM2-218ENST00000541586 AVPR1BP47901 424 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 FOLH1Q04609 750 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 MAP7Q14244 749 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 MTX3Q5HYI7 312 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 ERMP1Q7Z2K6 904 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 C6orf120Q7Z4R8 191 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 LRRC25Q8N386 305 aaPredicted RBP26.03■■□□□ 1.76
CCM2-218ENST00000541586 OR52E4Q8NGH9 312 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 OR9A2Q8NGT5 310 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 NRG4Q8WWG1 115 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 MR1Q95460 341 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 FAM162AQ96A26 154 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 COL26A1Q96A83 441 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 SPRY4Q9C004 299 aa26.03■■□□□ 1.76
CCM2-218ENST00000541586 FAF1Q9UNN5 650 aaPredicted RBP26.03■■□□□ 1.76
CCM2-218ENST00000541586 FGF17O60258 216 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 CCNYL3P0C7X3 344 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 DCDP81605 110 aaKnown RBP26.02■■□□□ 1.76
CCM2-218ENST00000541586 TMEM64Q6YI46 380 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 PQLC1Q8N2U9 271 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 FAM110BQ8TC76 370 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 TANKQ92844 425 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 MAL2Q969L2 176 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 AURKCQ9UQB9 309 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 CELSR3Q9NYQ7 3312 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 LDB3O75112 727 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 DLGAP3O95886 979 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 RNH1P13489 461 aaKnown RBP26.02■■□□□ 1.76
CCM2-218ENST00000541586 RORAP35398 523 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 MAT1AQ00266 395 aaKnown RBP26.02■■□□□ 1.76
CCM2-218ENST00000541586 GCNT6Q5T4J0 391 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 LCN10Q6JVE6 187 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 TMEM107Q6UX40 140 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 ZNF578Q96N58 590 aaPredicted RBP26.02■■□□□ 1.76
CCM2-218ENST00000541586 ZNF304Q9HCX3 659 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 ARMC1Q9NVT9 282 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 PADI1Q9ULC6 663 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 CDC14AQ9UNH5 594 aa26.02■■□□□ 1.76
CCM2-218ENST00000541586 H0YIG0 161 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 UMPSP11172 480 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 CPMP14384 443 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 AGXTP21549 392 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 GCKP35557 465 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 RPS26P62854 115 aaKnown RBP26.01■■□□□ 1.75
CCM2-218ENST00000541586 ID2Q02363 134 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 TP53BP2Q13625 1128 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 VEZF1Q14119 521 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 LTB4RQ15722 352 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 TBC1D25Q3MII6 688 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 SDK2Q58EX2 2172 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 IRAK1BP1Q5VVH5 260 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 LRRC74BQ6ZQY2 392 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 LILRA2Q8N149 483 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 C11orf65Q8NCR3 313 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 MAGED4Q96JG8 741 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 CLK4Q9HAZ1 481 aaKnown RBP26.01■■□□□ 1.75
CCM2-218ENST00000541586 ZCCHC3Q9NUD5 404 aaKnown RBP26.01■■□□□ 1.75
CCM2-218ENST00000541586 C6orf203Q9P0P8 240 aaPredicted RBP26.01■■□□□ 1.75
CCM2-218ENST00000541586 ANAPC2Q9UJX6 822 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 V9GYQ6 96 aa26.01■■□□□ 1.75
CCM2-218ENST00000541586 GPR75O95800 540 aa26■■□□□ 1.75
CCM2-218ENST00000541586 SYT16Q17RD7 645 aa26■■□□□ 1.75
CCM2-218ENST00000541586 ARHGAP40Q5TG30 622 aa26■■□□□ 1.75
CCM2-218ENST00000541586 SZRD1Q7Z422 152 aa26■■□□□ 1.75
CCM2-218ENST00000541586 NLGN4XQ8N0W4 816 aa26■■□□□ 1.75
CCM2-218ENST00000541586 NLGN4YQ8NFZ3 816 aaPredicted RBP26■■□□□ 1.75
CCM2-218ENST00000541586 SFXN5Q8TD22 340 aa26■■□□□ 1.75
CCM2-218ENST00000541586 TBC1D20Q96BZ9 403 aa26■■□□□ 1.75
CCM2-218ENST00000541586 MVB12AQ96EY5 273 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms