RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 COPS7BQ9H9Q2 264 aaPredicted RBP7.88□□□□□ -1.15
CHD4-208ENST00000540960 APMAPQ9HDC9 416 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 ADPRHL2Q9NX46 363 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 TAS2R9Q9NYW1 312 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 TMEM9Q9P0T7 183 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 LRIT1Q9P2V4 623 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 CPNE7Q9UBL6 633 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 PHF11Q9UIL8 331 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 AURKCQ9UQB9 309 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 WDR37Q9Y2I8 494 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 PCDHB14Q9Y5E9 798 aa7.88□□□□□ -1.15
CHD4-208ENST00000540960 PCDHGA9Q9Y5G4 932 aaKnown RBP7.88□□□□□ -1.15
CHD4-208ENST00000540960 A0A1W2PPV9 198 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 A0A1W2PRB8 838 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 C1orf226A1L170 272 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 MAGEA13PA6NCF6 341 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 LRIT2A6NDA9 550 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 GABRR3A8MPY1 467 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 CXCR6O00574 342 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 DPM1O60762 260 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 PDE9AO76083 593 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 STK17BO94768 372 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 SLITRK5O94991 958 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 LRATO95237 230 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 FUCA1P04066 466 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 GLB1P16278 677 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 UQCRC2P22695 453 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 NTSP30990 170 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 SSR2P43308 183 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 PRIM2P49643 509 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 IST1P53990 364 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 TAS2R50P59544 299 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 RAE1P78406 368 aaKnown RBP7.87□□□□□ -1.15
CHD4-208ENST00000540960 ATP6AP1Q15904 470 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 ZIC1Q15915 447 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 UGT8Q16880 541 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 HKDC1Q2TB90 917 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 ADPRMQ3LIE5 342 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 ZC3H12BQ5HYM0 836 aaKnown RBP7.87□□□□□ -1.15
CHD4-208ENST00000540960 NKAIN2Q5VXU1 208 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 OR4F3Q6IEY1 312 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 ZNF425Q6IV72 752 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 SLC30A9Q6PML9 568 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 ZBTB49Q6ZSB9 765 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 ABHD13Q7L211 337 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 ASPGQ86U10 573 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 CALHM3Q86XJ0 350 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 PDSS2Q86YH6 399 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 SPPL2CQ8IUH8 684 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 SVOPLQ8N434 492 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 FAM47BQ8NA70 645 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 LINC01555Q8NAE3 123 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 AGBL5Q8NDL9 886 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 ST6GALNAC3Q8NDV1 305 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 OR4A15Q8NGL6 344 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 CLHC1Q8NHS4 586 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 NT5CQ8TCD5 201 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 RASSF5Q8WWW0 418 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 GAL3ST3Q96A11 431 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 PDXPQ96GD0 296 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 ZNF583Q96ND8 569 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 DPH7Q9BTV6 452 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 EBPLQ9BY08 206 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 PCDHAC1Q9H158 963 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 TRIM45Q9H8W5 580 aaPredicted RBP7.87□□□□□ -1.15
CHD4-208ENST00000540960 TPT1P8Q9HAU6 139 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 MCCC2Q9HCC0 563 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 CHST11Q9NPF2 352 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 SERHLQ9NQF3 203 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 VAPAQ9P0L0 249 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 TAAR2Q9P1P5 351 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 EPHA6Q9UF33 1036 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 PLAGL1Q9UM63 463 aa7.87□□□□□ -1.15
CHD4-208ENST00000540960 CFAP20Q9Y6A4 193 aaKnown RBP7.87□□□□□ -1.15
CHD4-208ENST00000540960 CUBNO60494 3623 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 CACNA1CQ13936 2221 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 SYNDIG1LA6NDD5 238 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 OR52A4PA6NMU1 304 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 PDPK1O15530 556 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 DENRO43583 198 aaKnown RBP7.86□□□□□ -1.15
CHD4-208ENST00000540960 CREG1O75629 220 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 CPSF4O95639 269 aaKnown RBP7.86□□□□□ -1.15
CHD4-208ENST00000540960 DLGAP3O95886 979 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 AGR2O95994 175 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 IFI6P09912 130 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 LAMP1P11279 417 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 UQCRBP14927 111 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 ITGA2P17301 1181 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 TACR1P25103 407 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 CD1CP29017 333 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 MPIP34949 423 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 BSGP35613 385 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 CHI3L1P36222 383 aaPredicted RBP7.86□□□□□ -1.15
CHD4-208ENST00000540960 BUD31P41223 144 aaPredicted RBP7.86□□□□□ -1.15
CHD4-208ENST00000540960 SLC19A1P41440 591 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 RPS6KA3P51812 740 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 MTPNP58546 118 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 UBE2IP63279 158 aaKnown RBP7.86□□□□□ -1.15
CHD4-208ENST00000540960 ADRM1Q16186 407 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 VMACQ2NL98 169 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms