RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PIWIL3Q7Z3Z3 882 aaKnown RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 DTWD2Q8NBA8 298 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 OR5K1Q8NHB7 308 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 PEX11GQ96HA9 241 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 OR7D2Q96RA2 312 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 OSBPL10Q9BXB5 764 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 AMBRA1Q9C0C7 1298 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 SMOC1Q9H4F8 434 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 C11orf16Q9NQ32 467 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 ZSCAN32Q9NX65 697 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 NDUFAF4Q9P032 175 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 TMEFF2Q9UIK5 374 aaPredicted RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 CLDN16Q9Y5I7 305 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 SPEGQ15772 3267 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 HYKKA2RU49 373 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 SIGLEC6O43699 453 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 SRPX2O60687 465 aaPredicted RBP11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 SEMA7AO75326 666 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 JRKO75564 520 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 SLC34A2O95436 690 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 ZBTB11O95625 1053 aaPredicted RBP11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 GPR75O95800 540 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 EPPINO95925 133 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 CFIP05156 583 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 FOLR1P15328 257 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 PORP16435 677 aaPredicted RBP11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 KHKP50053 298 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 ALDH3A2P51648 485 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 ITGA1P56199 1179 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 ADARB1P78563 741 aaKnown RBP11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 DUSP8Q13202 625 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 SLC36A3Q495N2 470 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 PEAR1Q5VY43 1037 aaPredicted RBP11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 RBM45Q8IUH3 476 aaKnown RBP11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 LACC1Q8IV20 430 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 OFCC1Q8IZS5 231 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 OR56A1Q8NGH5 318 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 SLC35A4Q96G79 324 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 ZDHHC12Q96GR4 267 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 AHCYL2Q96HN2 611 aaKnown RBP11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 TREX2Q9BQ50 279 aaPredicted RBP11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 QRSL1Q9H0R6 528 aaKnown RBP11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 PDE7BQ9NP56 450 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 MS4A12Q9NXJ0 267 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 SMPD3Q9NY59 655 aaPredicted RBP11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 PSME2Q9UL46 239 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 ZNF451Q9Y4E5 1061 aa11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 MN1Q10571 1320 aaPredicted RBP11.5□□□□□ -0.57
AP003559.1-201ENST00000540906 MAGEA13PA6NCF6 341 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 C5orf58C9J3I9 102 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 SMIM18P0DKX4 95 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 PPP2R1BP30154 601 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 TLX1P31314 330 aaPredicted RBP11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 POLR2IP36954 125 aaKnown RBP11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 PIGAP37287 484 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 CHN2P52757 468 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 BTG2P78543 158 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 EXOSC7Q15024 291 aaKnown RBP11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 IFI44LQ53G44 452 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 MFSD12Q6NUT3 480 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 SHQ1Q6PI26 577 aaKnown RBP11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 ZNF574Q6ZN55 896 aaPredicted RBP11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 CYP4Z1Q86W10 505 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 ZDHHC13Q8IUH4 622 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 OR2L13Q8N349 312 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 TTC29Q8NA56 475 aaPredicted RBP11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 SLC16A11Q8NCK7 471 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 OR1L3Q8NH93 324 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 MIPOL1Q8TD10 442 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 CYGBQ8WWM9 190 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 ZG16BQ96DA0 208 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 COL21A1Q96P44 957 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 NPLQ9BXD5 320 aaPredicted RBP11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 ANKRD60Q9BZ19 345 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 TOR3AQ9H497 397 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 GAREM1Q9H706 876 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 IRAK4Q9NWZ3 460 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 NLGN3Q9NZ94 848 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 MAT2BQ9NZL9 334 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 NTMQ9P121 344 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 P2RX2Q9UBL9 471 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 PADI2Q9Y2J8 665 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 SH3GLB1Q9Y371 365 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 TESMINQ9Y4I5 508 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 NINQ8N4C6 2090 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 CPED1A4D0V7 1026 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 FITM1A5D6W6 292 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 HRKO00198 91 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 DUX1O43812 170 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 E2F6O75461 281 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 THRBP10828 461 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 ACP2P11117 423 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 RRM2P31350 389 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 DAPP51397 102 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 INAVAQ3KP66 663 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 PATL1Q86TB9 770 aaKnown RBP11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 LGI4Q8N135 537 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 SVOPLQ8N434 492 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 OR4C6Q8NH72 309 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms