RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ING3Q9NXR8 418 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 FAM8A1Q9UBU6 413 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 ADAM30Q9UKF2 790 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 ALG5Q9Y673 324 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 TRDV1A0A1B0GX56 115 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 A0A1W2PRQ8 180 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 SGK494L7N484 410 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 NRG2O14511 850 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-218ENST00000537641 PRODHO43272 600 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 TLX2O43763 284 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-218ENST00000537641 MMP20O60882 483 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 CXCL14O95715 111 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 CSF2P04141 144 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 CCNYL3P0C7X3 344 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 FAM157BP0CG42 384 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 DDCP20711 480 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 GSTM3P21266 225 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 HLA-FP30511 346 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 OPRD1P41143 372 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 HTR2BP41595 481 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 SMSP52788 366 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 CTSCP53634 463 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 EFNB1P98172 346 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 CDK5Q00535 292 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 TARDBPQ13148 414 aaKnown RBP eCLIP11.5□□□□□ -0.57
CPSF7-218ENST00000537641 SF3A2Q15428 464 aaKnown RBP11.5□□□□□ -0.57
CPSF7-218ENST00000537641 TATDN3Q17R31 274 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 LRRC73Q5JTD7 316 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 CREB3L2Q70SY1 520 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 WDR53Q7Z5U6 358 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-218ENST00000537641 LRRC56Q8IYG6 542 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-218ENST00000537641 CHST14Q8NCH0 376 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 ATP6V1C2Q8NEY4 427 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 NLGN4YQ8NFZ3 816 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-218ENST00000537641 FOXJ1Q92949 421 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 ZNF764Q96H86 408 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-218ENST00000537641 EPHX3Q9H6B9 360 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 GIMAP4Q9NUV9 329 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 AHSPQ9NZD4 102 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 A4GNTQ9UNA3 340 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 SH2B3Q9UQQ2 575 aa11.5□□□□□ -0.57
CPSF7-218ENST00000537641 SAP18O00422 153 aaKnown RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 PDPK1O15530 556 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 ORC5O43913 435 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 SH3BP5O60239 455 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 SEMA7AO75326 666 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 FHP07954 510 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 ITGB8P26012 769 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 GPLD1P80108 840 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 UBE3AQ05086 875 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 GINS1Q14691 196 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 MINDY4Q4G0A6 757 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 ZNF658BQ4V348 819 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 FLYWCH1Q4VC44 716 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 CRTC2Q53ET0 693 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 SIGIRRQ6IA17 410 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 MZT2AQ6P582 158 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 TNFAIP8L2Q6P589 184 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 Q6ZVL8 140 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 MRGPREQ86SM8 312 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 SLC9B2Q86UD5 537 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 TRIM48Q8IWZ4 208 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 LILRA3Q8N6C8 439 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 IQCF1Q8N6M8 205 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 ZNF557Q8N988 423 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 OR4D11Q8NGI4 311 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 OR9A1PQ8NGU1 263 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 OR52P1PQ8NH57 321 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 SETD7Q8WTS6 366 aaKnown RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 C1GALT1C1Q96EU7 318 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 LRR1Q96L50 414 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 SMG9Q9H0W8 520 aaKnown RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 STMN3Q9NZ72 180 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 A0A0G2JMP0 313 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 ANHXE9PGG2 379 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 LYRM1O43325 122 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 CPNE3O75131 537 aaKnown RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 FGF19O95750 216 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 CRYZL1O95825 349 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 TNNI3P19429 210 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 DDX6P26196 483 aaKnown RBP eCLIP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 APEX1P27695 318 aaKnown RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 NUDT1P36639 197 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 ETV3P41162 512 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 FRKP42685 505 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 RECQLP46063 649 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 MAN2A2P49641 1150 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 RRAS2P62070 204 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 MAB21L1Q13394 359 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 TMEM44Q2T9K0 475 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 ENTPD8Q5MY95 495 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 CCNJQ5T5M9 372 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 C1orf94Q6P1W5 598 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 PODNL1Q6PEZ8 512 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 CNIH2Q6PI25 160 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 Q6ZVU0 165 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 DPPA4Q7L190 304 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 C6orf120Q7Z4R8 191 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 BCDIN3DQ7Z5W3 292 aaKnown RBP11.49□□□□□ -0.57
CPSF7-218ENST00000537641 TECPR1Q7Z6L1 1165 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms