RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 RSPRY1Q96DX4 576 aa13.27□□□□□ -0.29
LIG1-203ENST00000536218 MRGPRX3Q96LB0 322 aa13.27□□□□□ -0.29
LIG1-203ENST00000536218 SLC28A3Q9HAS3 691 aa13.27□□□□□ -0.29
LIG1-203ENST00000536218 IL20Q9NYY1 176 aa13.27□□□□□ -0.29
LIG1-203ENST00000536218 IL36AQ9UHA7 158 aa13.27□□□□□ -0.29
LIG1-203ENST00000536218 SSR3Q9UNL2 185 aa13.27□□□□□ -0.29
LIG1-203ENST00000536218 SLC22A14Q9Y267 594 aa13.27□□□□□ -0.29
LIG1-203ENST00000536218 PPIL1Q9Y3C6 166 aa13.27□□□□□ -0.29
LIG1-203ENST00000536218 POM121CA8CG34 1229 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 B3GALT4O96024 378 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 VIPR1P32241 457 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 CRYZQ08257 329 aaKnown RBP13.26□□□□□ -0.29
LIG1-203ENST00000536218 TSTA3Q13630 321 aaPredicted RBP13.26□□□□□ -0.29
LIG1-203ENST00000536218 ZNF169Q14929 603 aaPredicted RBP13.26□□□□□ -0.29
LIG1-203ENST00000536218 PDE12Q6L8Q7 609 aaKnown RBP13.26□□□□□ -0.29
LIG1-203ENST00000536218 KANSL1Q7Z3B3 1105 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 LIX1Q8N485 282 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 TMEM145Q8NBT3 493 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 SECISBP2Q96T21 854 aaKnown RBP13.26□□□□□ -0.29
LIG1-203ENST00000536218 FEVQ99581 238 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 P2RY13Q9BPV8 354 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 HDHD2Q9H0R4 259 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 HHATLQ9HCP6 504 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 ZFP64Q9NPA5 681 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 WASH3PC4AMC7 463 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 AKAP8O43823 692 aaKnown RBP13.26□□□□□ -0.29
LIG1-203ENST00000536218 SLC43A1O75387 559 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 PREPP48147 710 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 ST8SIA6P61647 398 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.26□□□□□ -0.29
LIG1-203ENST00000536218 LIPKQ5VXJ0 399 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 C22orf42Q6IC83 251 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 ASB18Q6ZVZ8 466 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 LILRB2Q8N423 598 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 WDR48Q8TAF3 677 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 CREB3L4Q8TEY5 395 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 SHARPINQ9H0F6 387 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 PLCXD1Q9NUJ7 323 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 HCN3Q9P1Z3 774 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 FKBP7Q9Y680 259 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 KCNMB2Q9Y691 235 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 FAM25EA8MYX2 175 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 UPK3BL1B0FP48 263 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 UPK3BL2E5RIL1 263 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 RGS14O43566 566 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 FGF19O95750 216 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 CA3P07451 260 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 ADH5P11766 374 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 HSF2Q03933 536 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 HSD17B12Q53GQ0 312 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 PM20D2Q8IYS1 436 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 SELENOMQ8WWX9 145 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 NXPE3Q969Y0 559 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 CIDECQ96AQ7 238 aaPredicted RBP13.26□□□□□ -0.29
LIG1-203ENST00000536218 ZNF707Q96C28 371 aaPredicted RBP13.26□□□□□ -0.29
LIG1-203ENST00000536218 NPAS1Q99742 590 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 TTYH1Q9H313 450 aaPredicted RBP13.26□□□□□ -0.29
LIG1-203ENST00000536218 ANKRA2Q9H9E1 313 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 ZNF226Q9NYT6 803 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 CLEC2DQ9UHP7 191 aa13.26□□□□□ -0.29
LIG1-203ENST00000536218 NOSIPQ9Y314 301 aaKnown RBP13.26□□□□□ -0.29
LIG1-203ENST00000536218 CFAP20Q9Y6A4 193 aaKnown RBP13.26□□□□□ -0.29
LIG1-203ENST00000536218 SLC22A23A1A5C7 686 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 GRXCR2A6NFK2 248 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 OTOL1A6NHN0 477 aaPredicted RBP13.25□□□□□ -0.29
LIG1-203ENST00000536218 ELFN1P0C7U0 828 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 SDHBP21912 280 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 MAOBP27338 520 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 CTSCP53634 463 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 VSX2P58304 361 aaPredicted RBP13.25□□□□□ -0.29
LIG1-203ENST00000536218 LGALSLQ3ZCW2 172 aaPredicted RBP13.25□□□□□ -0.29
LIG1-203ENST00000536218 TMPRSS9Q7Z410 1059 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 HSH2DQ96JZ2 352 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 COQ10AQ96MF6 247 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 MARVELD1Q9BSK0 173 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 TMEM168Q9H0V1 697 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 SLC35F4A4IF30 521 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 F8W036 122 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 MANBAO00462 879 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 CLDN9O95484 217 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 APOC3P02656 99 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 MAGEA2P43356 314 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 GDI2P50395 445 aaKnown RBP13.25□□□□□ -0.29
LIG1-203ENST00000536218 DDX39BQ13838 428 aaKnown RBP13.25□□□□□ -0.29
LIG1-203ENST00000536218 CNIH2Q6PI25 160 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 DOK6Q6PKX4 331 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 LMNTD1Q8N9Z9 388 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 ATOH1Q92858 354 aaPredicted RBP13.25□□□□□ -0.29
LIG1-203ENST00000536218 PPP3R2Q96LZ3 170 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 SLC32A1Q9H598 525 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 LRTM1Q9HBL6 345 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 B3GAT2Q9NPZ5 323 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 HEBP1Q9NRV9 189 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 CUEDC1Q9NWM3 386 aaPredicted RBP13.25□□□□□ -0.29
LIG1-203ENST00000536218 COPZ2Q9P299 210 aa13.25□□□□□ -0.29
LIG1-203ENST00000536218 IQCMA0A1B0GVH7 501 aa13.24□□□□□ -0.29
LIG1-203ENST00000536218 LINC00587B1AMM8 73 aa13.24□□□□□ -0.29
LIG1-203ENST00000536218 PRRT4C9JH25 899 aa13.24□□□□□ -0.29
LIG1-203ENST00000536218 ZNF670-ZNF695F2Z2N8 137 aa13.24□□□□□ -0.29
LIG1-203ENST00000536218 M0R233 179 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms