RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 OR2T11Q8NH01 316 aa20.26■□□□□ 0.83
SSPN-204ENST00000535504 ZFP28Q8NHY6 868 aa20.26■□□□□ 0.83
SSPN-204ENST00000535504 PPCDCQ96CD2 204 aa20.26■□□□□ 0.83
SSPN-204ENST00000535504 WWTR1Q9GZV5 400 aa20.26■□□□□ 0.83
SSPN-204ENST00000535504 CCL27Q9Y4X3 112 aa20.26■□□□□ 0.83
SSPN-204ENST00000535504 HRKO00198 91 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 P04436 131 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 PRPS2P11908 318 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 EDN3P14138 238 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 H2AFXP16104 143 aaPredicted RBP20.25■□□□□ 0.83
SSPN-204ENST00000535504 SOX3P41225 446 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 NCBP2P52298 156 aaKnown RBP eCLIP20.25■□□□□ 0.83
SSPN-204ENST00000535504 RPP38P78345 283 aaKnown RBP20.25■□□□□ 0.83
SSPN-204ENST00000535504 MPP2Q14168 576 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 KIAA0040Q15053 153 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 EBPQ15125 230 aaKnown RBP20.25■□□□□ 0.83
SSPN-204ENST00000535504 PRICKLE4Q2TBC4 344 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 PIGGQ5H8A4 983 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 POGLUT1Q8NBL1 392 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 ADCY4Q8NFM4 1077 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 ZNF675Q8TD23 568 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 DYDC1Q8WWB3 177 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 TP53INP1Q96A56 240 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 TSSK3Q96PN8 268 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 PRPF18Q99633 342 aaKnown RBP20.25■□□□□ 0.83
SSPN-204ENST00000535504 THAP1Q9NVV9 213 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 MAT2BQ9NZL9 334 aa20.25■□□□□ 0.83
SSPN-204ENST00000535504 NBASA2RRP1 2371 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 A0A1W2PS29 197 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 ANKUB1A6NFN9 424 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 HMGB1P1B2RPK0 211 aaPredicted RBP20.24■□□□□ 0.83
SSPN-204ENST00000535504 ITM2AO43736 263 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 COQ9O75208 318 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 DCAF7P61962 342 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 ALDH6A1Q02252 535 aaKnown RBP20.24■□□□□ 0.83
SSPN-204ENST00000535504 SRSF11Q05519 484 aaKnown RBP20.24■□□□□ 0.83
SSPN-204ENST00000535504 BST1Q10588 318 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 RFTN2Q52LD8 501 aaPredicted RBP20.24■□□□□ 0.83
SSPN-204ENST00000535504 XKR7Q5GH72 579 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 ZNF468Q5VIY5 522 aaPredicted RBP20.24■□□□□ 0.83
SSPN-204ENST00000535504 FAM180BQ6P0A1 224 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 GOLM1Q8NBJ4 401 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 ST6GALNAC3Q8NDV1 305 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 NR4A3Q92570 626 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 GFM2Q969S9 779 aaKnown RBP20.24■□□□□ 0.83
SSPN-204ENST00000535504 ZNF681Q96N22 645 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 REEP4Q9H6H4 257 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 MANSC1Q9H8J5 431 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 TAS2R7Q9NYW3 318 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 SH3BP4Q9P0V3 963 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 MAPRE3Q9UPY8 281 aa20.24■□□□□ 0.83
SSPN-204ENST00000535504 ATP6AP2A0A1C7CYW4 349 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 SLCO1B7G3V0H7 640 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 TP53I11O14683 189 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 PDPK1O15530 556 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 AKAP10O43572 662 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 ATP6AP2O75787 350 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 OR6B1O95007 311 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 CT62P0C5K7 136 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 SDC1P18827 310 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 GPC1P35052 558 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 NR0B1P51843 470 aaKnown RBP20.23■□□□□ 0.83
SSPN-204ENST00000535504 PSPHP78330 225 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 RBPJQ06330 500 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 FAM111BQ6SJ93 734 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 C16orf47Q6ZP98 133 aaPredicted RBP20.23■□□□□ 0.83
SSPN-204ENST00000535504 PSD4Q8NDX1 1056 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 C17orf47Q8NEP4 570 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 OR52R1Q8NGF1 315 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 OR9A2Q8NGT5 310 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 MTERF3Q96E29 417 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 ZBED6CLQ96FA7 236 aaPredicted RBP20.23■□□□□ 0.83
SSPN-204ENST00000535504 FCRL1Q96LA6 429 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 SACM1LQ9NTJ5 587 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 ATAD3AQ9NVI7 634 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 TAS2R9Q9NYW1 312 aa20.23■□□□□ 0.83
SSPN-204ENST00000535504 NOP53Q9NZM5 478 aaKnown RBP20.23■□□□□ 0.83
SSPN-204ENST00000535504 TMEM200CA6NKL6 621 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 TRPC5OSA6NMA1 111 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 TCP11X1B4DZS4 312 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 ACOT7O00154 380 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 LRATO95237 230 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 ZNF24P17028 368 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 GNLYP22749 145 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 ARRB2P32121 409 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 WDR4P57081 412 aaKnown RBP20.22■□□□□ 0.83
SSPN-204ENST00000535504 SMU1Q2TAY7 513 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 GK5Q6ZS86 529 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.22■□□□□ 0.83
SSPN-204ENST00000535504 LIX1Q8N485 282 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 FAM13CQ8NE31 585 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 C16orf52Q8NHV5 167 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 ARL8AQ96BM9 186 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 SPACA9Q96E40 222 aaPredicted RBP20.22■□□□□ 0.83
SSPN-204ENST00000535504 ZNF764Q96H86 408 aaPredicted RBP20.22■□□□□ 0.83
SSPN-204ENST00000535504 C1orf50Q9BV19 199 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 HES7Q9BYE0 225 aa20.22■□□□□ 0.83
SSPN-204ENST00000535504 MYO1GB0I1T2 1018 aa20.21■□□□□ 0.83
SSPN-204ENST00000535504 PEX1O43933 1283 aa20.21■□□□□ 0.83
SSPN-204ENST00000535504 JUNP05412 331 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms