RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 IGLV3-21P80748 117 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-206ENST00000535290 TIAL1Q01085 375 aaKnown RBP eCLIP7.44□□□□□ -1.22
CLIP1-206ENST00000535290 ZNF844Q08AG5 666 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 RCN2Q14257 317 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 ZNF267Q14586 743 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-206ENST00000535290 ZNF672Q499Z4 452 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-206ENST00000535290 ZNF470Q6ECI4 717 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 ABHD17CQ6PCB6 329 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 CLEC2AQ6UVW9 174 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 SLC29A4Q7RTT9 530 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 ATG4DQ86TL0 474 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-206ENST00000535290 TAGAPQ8N103 731 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 ZNF525Q8N782 197 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 OR2L5Q8NG80 312 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 ATG4AQ8WYN0 398 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 HTRA1Q92743 480 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 MSI2Q96DH6 328 aaKnown RBP7.44□□□□□ -1.22
CLIP1-206ENST00000535290 DGAT2Q96PD7 388 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 MAPKAP1Q9BPZ7 522 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 ERVK-6Q9BXR3 956 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 OR2B2Q9GZK3 357 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 ACTR6Q9GZN1 396 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 GALNT9Q9HCQ5 603 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 PRDM7Q9NQW5 492 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 FBXO6Q9NRD1 293 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-206ENST00000535290 INTS10Q9NVR2 710 aaKnown RBP7.44□□□□□ -1.22
CLIP1-206ENST00000535290 SYBUQ9NX95 663 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 TAS2R10Q9NYW0 307 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 BFARQ9NZS9 450 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 PROCRQ9UNN8 238 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 ERVK-19Q9WJR5 959 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 A0A088AWK7 358 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 GRID2IPA4D2P6 1211 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 CTAGE9A4FU28 777 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 CAPN14A8MX76 684 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 H0YC42 278 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 GUCA1CO95843 209 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 HIST1H2AGP0C0S8 130 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 SLC25A16P16260 332 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 HIST1H2ADP20671 130 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 HNF1AP20823 631 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 ZNF10P21506 573 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 USF1P22415 310 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 TCEA1P23193 301 aaKnown RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 STIP1P31948 543 aaKnown RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 PTGDSP41222 190 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 NPY2RP49146 381 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 GZMKP49863 264 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 TPD52P55327 224 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 CLDN15P56746 228 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 RWDD2BP57060 319 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 DSCR9P59020 149 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 IRX1P78414 480 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 PCDH1Q08174 1060 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 SP140Q13342 867 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 KLF1Q13351 362 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 SETDB1Q15047 1291 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 GUSBP1Q15486 140 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 PDCD2Q16342 344 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 SWI5Q1ZZU3 235 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 ADPRMQ3LIE5 342 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 MIDNQ504T8 468 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 NCMAPQ5T1S8 102 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 ADNP2Q6IQ32 1131 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 TRIM40Q6P9F5 258 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 DNAJC14Q6Y2X3 702 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 ZNF793Q6ZN11 406 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 RNF111Q6ZNA4 994 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 VN1R5Q7Z5H4 357 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 UBE3DQ7Z6J8 389 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 DTX2Q86UW9 622 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 THOC6Q86W42 341 aaKnown RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 IFNEQ86WN2 208 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 PALM2Q8IXS6 379 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 PRR22Q8IZ63 422 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 WDSUB1Q8N9V3 476 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 KBTBD8Q8NFY9 601 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 FBXL8Q96CD0 374 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 RBM18Q96H35 190 aaKnown RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 HIST1H2AHQ96KK5 128 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 SFXN2Q96NB2 322 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 HIST1H2AJQ99878 128 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 H2AFJQ9BTM1 129 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 REXO4Q9GZR2 422 aaKnown RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 CCDC68Q9H2F9 335 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 RNF122Q9H9V4 155 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 LYRM4Q9HD34 91 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 EXO1Q9UQ84 846 aaKnown RBP7.43□□□□□ -1.22
CLIP1-206ENST00000535290 SLC22A14Q9Y267 594 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 DYRK1BQ9Y463 629 aa7.43□□□□□ -1.22
CLIP1-206ENST00000535290 PRKDCP78527 4128 aaKnown RBP7.42□□□□□ -1.22
CLIP1-206ENST00000535290 C2orf92A0A1B0GVN3 265 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 GOLGA6L9A6NEM1 432 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 WASHC1A8K0Z3 465 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 DYRK3O43781 588 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 ICOSLGO75144 302 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 CBR3O75828 277 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 PTMAP06454 111 aaKnown RBP7.42□□□□□ -1.22
CLIP1-206ENST00000535290 CD3EP07766 207 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms