RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ANXA4P09525 319 aaPredicted RBP9.09□□□□□ -0.95
NUP98-220ENST00000533346 FBXO45P0C2W1 286 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 SERPINB3P29508 390 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 DEKP35659 375 aaKnown RBP9.09□□□□□ -0.95
NUP98-220ENST00000533346 SOX3P41225 446 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 DCAF7P61962 342 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 ALDH6A1Q02252 535 aaKnown RBP9.09□□□□□ -0.95
NUP98-220ENST00000533346 NTRK2Q16620 822 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 MAPKAPK3Q16644 382 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 SMU1Q2TAY7 513 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 C4orf17Q53FE4 359 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 ZNF628Q5EBL2 1059 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 ARL13AQ5H913 290 aaPredicted RBP9.09□□□□□ -0.95
NUP98-220ENST00000533346 NOXRED1Q6NXP6 359 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 MDGA2Q7Z553 956 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.09□□□□□ -0.95
NUP98-220ENST00000533346 LRRC34Q8IZ02 419 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 KIRREL3Q8IZU9 778 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 LRRC25Q8N386 305 aaPredicted RBP9.09□□□□□ -0.95
NUP98-220ENST00000533346 SSC4DQ8WTU2 575 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 SPACA9Q96E40 222 aaPredicted RBP9.09□□□□□ -0.95
NUP98-220ENST00000533346 HSPBAP1Q96EW2 488 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 STMN4Q9H169 189 aaPredicted RBP9.09□□□□□ -0.95
NUP98-220ENST00000533346 SLC35C2Q9NQQ7 365 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 KLHL1Q9NR64 748 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 C1orf109Q9NX04 203 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 CNIH4Q9P003 139 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 SEC14L3Q9UDX4 400 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 UTS2RQ9UKP6 389 aa9.09□□□□□ -0.95
NUP98-220ENST00000533346 EXO1Q9UQ84 846 aaKnown RBP9.09□□□□□ -0.95
NUP98-220ENST00000533346 NCOA6Q14686 2063 aaPredicted RBP9.08□□□□□ -0.96
NUP98-220ENST00000533346 A0A087WV62 115 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 GNG14A0A1W2PPG7 69 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 TMEM114B3SHH9 223 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 PLOD2O00469 737 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 LSM1O15116 133 aaKnown RBP9.08□□□□□ -0.96
NUP98-220ENST00000533346 ACOX3O15254 700 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 ASNA1O43681 348 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 SEMA7AO75326 666 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 CRCPO75575 148 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 GLSO94925 669 aaPredicted RBP9.08□□□□□ -0.96
NUP98-220ENST00000533346 CBX7O95931 251 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 CHEK2O96017 543 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 LDLRP01130 860 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 CHRNGP07510 517 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 NT5EP21589 574 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 DRD5P21918 477 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 GPX3P22352 226 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 SSTR4P31391 388 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 ARRB2P32121 409 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 MPIP34949 423 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 FRKP42685 505 aaPredicted RBP9.08□□□□□ -0.96
NUP98-220ENST00000533346 SERPINB4P48594 390 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 MEOX1P50221 254 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 EMDP50402 254 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 DUSP2Q05923 314 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 RBPJQ06330 500 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 IMPG1Q17R60 797 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 XKR7Q5GH72 579 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 RNFT1Q5M7Z0 435 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 TBCELQ5QJ74 424 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 CEP85LQ5SZL2 805 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 FAM219BQ5XKK7 198 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 SLC22A10Q63ZE4 541 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 CLEC6AQ6EIG7 209 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 IL20RBQ6UXL0 311 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 C16orf47Q6ZP98 133 aaPredicted RBP9.08□□□□□ -0.96
NUP98-220ENST00000533346 CHERPQ8IWX8 916 aaKnown RBP9.08□□□□□ -0.96
NUP98-220ENST00000533346 TAGAPQ8N103 731 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 VWA5B2Q8N398 1253 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 CPSF7Q8N684 471 aaKnown RBP9.08□□□□□ -0.96
NUP98-220ENST00000533346 OR2M7Q8NG81 312 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 OR2T11Q8NH01 316 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 PRR7Q8TB68 274 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 KLHL29Q96CT2 875 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 MTERF3Q96E29 417 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 FAM173AQ9BQD7 235 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 MECRQ9BV79 373 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 CNPPD1Q9BV87 410 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 ZDHHC11Q9H8X9 412 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 LIN28AQ9H9Z2 209 aaKnown RBP9.08□□□□□ -0.96
NUP98-220ENST00000533346 LRTM1Q9HBL6 345 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 PROK2Q9HC23 129 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 SACM1LQ9NTJ5 587 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 DEPPQ9NTK1 212 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 QPCTLQ9NXS2 382 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 PRODH2Q9UF12 536 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 ERRFI1Q9UJM3 462 aaPredicted RBP9.08□□□□□ -0.96
NUP98-220ENST00000533346 ERVK-11Q9UQG0 969 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 CHCHD2Q9Y6H1 151 aaPredicted RBP9.08□□□□□ -0.96
NUP98-220ENST00000533346 SVILO95425 2214 aa9.08□□□□□ -0.96
NUP98-220ENST00000533346 UNC79Q9P2D8 2635 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 A0A1B0GVC2 190 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 SEC22BO75396 215 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 ERAL1O75616 437 aaKnown RBP9.07□□□□□ -0.96
NUP98-220ENST00000533346 PSMG1O95456 288 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 IGHG3P01860 377 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 SERPINE1P05121 402 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 MYZAPP0CAP1 466 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 PCSK2P16519 638 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms