RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 HOPXQ9BPY8 73 aaPredicted RBP16.78■□□□□ 0.28
PPP1CA-208ENST00000532446 MESP1Q9BRJ9 268 aa16.78■□□□□ 0.28
PPP1CA-208ENST00000532446 SLC35A5Q9BS91 424 aa16.78■□□□□ 0.28
PPP1CA-208ENST00000532446 NDE1Q9NXR1 346 aa16.78■□□□□ 0.28
PPP1CA-208ENST00000532446 PTGFRNQ9P2B2 879 aa16.78■□□□□ 0.28
PPP1CA-208ENST00000532446 ZNF639Q9UID6 485 aa16.78■□□□□ 0.28
PPP1CA-208ENST00000532446 KCND3Q9UK17 655 aa16.78■□□□□ 0.28
PPP1CA-208ENST00000532446 GMEB1Q9Y692 573 aa16.78■□□□□ 0.28
PPP1CA-208ENST00000532446 AKAP13Q12802 2813 aa16.78■□□□□ 0.28
PPP1CA-208ENST00000532446 A0A087WV62 115 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 LOC102723996A0A087X1L8 192 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 C17orf105B2RV13 164 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 PCDH17O14917 1159 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 IGHEP01854 428 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 S1PR1P21453 382 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 SOAT1P35610 550 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 CCT3P49368 545 aaKnown RBP16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 RASSF2P50749 326 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 NCALDP61601 193 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 TRMT12Q53H54 448 aaKnown RBP16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 SFT2D3Q587I9 215 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 NANOGP8Q6NSW7 305 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 C16orf89Q6UX73 402 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 PGAM4Q8N0Y7 254 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 OR2L13Q8N349 312 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 VWA5B2Q8N398 1253 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 OR5AK3PQ8NH89 298 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 DOK4Q8TEW6 326 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 AURKBQ96GD4 344 aaPredicted RBP16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 EPS8L2Q9H6S3 715 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 NANOGQ9H9S0 305 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 C3orf14Q9HBI5 128 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 C19orf25Q9UFG5 118 aaPredicted RBP16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 HS3ST3B1Q9Y662 390 aa16.77■□□□□ 0.28
PPP1CA-208ENST00000532446 KMT2BQ9UMN6 2715 aaPredicted RBP16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 RNF103-CHMP3A0A140T963 221 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 A8MUA0 341 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 UPK1AO00322 258 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 EMC8O43402 210 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 C1QCP02747 245 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 TNNI3P19429 210 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 SLC6A2P23975 617 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 MMP11P24347 488 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 PSME3P61289 254 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 SSPNQ14714 243 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 ST3GAL2Q16842 350 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 CPEB2Q7Z5Q1 589 aaKnown RBP16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 OR14A16Q8NHC5 309 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 MOAP1Q96BY2 351 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 WDR77Q9BQA1 342 aaPredicted RBP16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 CPPED1Q9BRF8 314 aaPredicted RBP16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 BTBD10Q9BSF8 475 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 ANKRA2Q9H9E1 313 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 TPT1P8Q9HAU6 139 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 C19orf53Q9UNZ5 99 aaPredicted RBP16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 CLCA3PQ9Y6N3 262 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 USP24Q9UPU5 2620 aa16.76■□□□□ 0.27
PPP1CA-208ENST00000532446 C15orf38-AP3S2A0A0A6YYH1 394 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 HRKO00198 91 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 CLIC1O00299 241 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 PGDP52209 483 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 PRR5P85299 388 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 FUT7Q11130 342 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 ZNF267Q14586 743 aaPredicted RBP16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 SPDYE7PQ495Y7 208 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 C6orf163Q5TEZ5 329 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 SAXO2Q658L1 398 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 GPR155Q7Z3F1 870 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 ARPINQ7Z6K5 226 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 DEFB107AQ8IZN7 70 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 SIMC1Q8NDZ2 872 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 OR8J3Q8NGG0 315 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 OR56A1Q8NGH5 318 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 DAZLQ92904 295 aaKnown RBP16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 KIAA1143Q96AT1 154 aaPredicted RBP16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 C8orf44Q96CB5 159 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 NEURL3Q96EH8 262 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 SENP5Q96HI0 755 aaPredicted RBP16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 FBXL20Q96IG2 436 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 MAGED4Q96JG8 741 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 IKZF5Q9H5V7 419 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 GPN2Q9H9Y4 310 aaPredicted RBP16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 ZCCHC3Q9NUD5 404 aaKnown RBP16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 DDX18Q9NVP1 670 aaKnown RBP16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 IL17BQ9UHF5 180 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 FREM2Q5SZK8 3169 aa16.75■□□□□ 0.27
PPP1CA-208ENST00000532446 IGHV3-20A0A0C4DH32 117 aa16.74■□□□□ 0.27
PPP1CA-208ENST00000532446 A0A1W2PQ72 361 aa16.74■□□□□ 0.27
PPP1CA-208ENST00000532446 ERICH4A6NGS2 130 aa16.74■□□□□ 0.27
PPP1CA-208ENST00000532446 GYG2O15488 501 aa16.74■□□□□ 0.27
PPP1CA-208ENST00000532446 DYRK3O43781 588 aa16.74■□□□□ 0.27
PPP1CA-208ENST00000532446 PSMG1O95456 288 aa16.74■□□□□ 0.27
PPP1CA-208ENST00000532446 DDAH2O95865 285 aa16.74■□□□□ 0.27
PPP1CA-208ENST00000532446 CBX7O95931 251 aa16.74■□□□□ 0.27
PPP1CA-208ENST00000532446 PPIBP23284 216 aaKnown RBP16.74■□□□□ 0.27
PPP1CA-208ENST00000532446 CHI3L1P36222 383 aaPredicted RBP16.74■□□□□ 0.27
PPP1CA-208ENST00000532446 SELPLGQ14242 412 aa16.74■□□□□ 0.27
PPP1CA-208ENST00000532446 RABL3Q5HYI8 236 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms