RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 PRAMEF1O95521 474 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 MPC2O95563 127 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 CNOT4O95628 575 aaKnown RBP7.14□□□□□ -1.27
SOX6-208ENST00000527619 GLP2RO95838 553 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 PRPS2P11908 318 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 APEX1P27695 318 aaKnown RBP7.14□□□□□ -1.27
SOX6-208ENST00000527619 WNT5AP41221 380 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 INPP1P49441 399 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 NDUFV1P49821 464 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 CLCN7P51798 805 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 TAP2Q03519 686 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 LMAN2Q12907 356 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 MAD2L1Q13257 205 aaPredicted RBP7.14□□□□□ -1.27
SOX6-208ENST00000527619 TTLL9Q3SXZ7 439 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 PAN2Q504Q3 1202 aaKnown RBP7.14□□□□□ -1.27
SOX6-208ENST00000527619 SLC27A4Q6P1M0 643 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 TMEM107Q6UX40 140 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 OVCH2Q7RTZ1 564 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 ADGRD2Q7Z7M1 963 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 LHFPL3Q86UP9 236 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 ZNF511Q8NB15 262 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 TMEM145Q8NBT3 493 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 OR11H4Q8NGC9 324 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 OR52B6Q8NGF0 335 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 SFT2D1Q8WV19 159 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 AP3S1Q92572 193 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 UCN3Q969E3 161 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 ATG4CQ96DT6 458 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 P2RY13Q9BPV8 354 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 GSX2Q9BZM3 304 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 CRISPLD1Q9H336 500 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 NT5DC2Q9H857 520 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 SLC28A3Q9HAS3 691 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 RBM22Q9NW64 420 aaKnown RBP eCLIP7.14□□□□□ -1.27
SOX6-208ENST00000527619 ZNF222Q9UK12 451 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 DLGAP4Q9Y2H0 992 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 KCNK7Q9Y2U2 307 aa7.14□□□□□ -1.27
SOX6-208ENST00000527619 PRAMEF33A0A0G2JMD5 474 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 FAM170BA6NMN3 283 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 WWP2O00308 870 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 IRAK2O43187 625 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 MAFKO60675 156 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 PRAMEF10O60809 474 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 PAGE1O75459 146 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 AP2A2O94973 939 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 PEX11BO96011 259 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 ANXA3P12429 323 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 HLA-EP13747 358 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 STOMP27105 288 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 CRABP1P29762 137 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 SDC2P34741 201 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 ZNF81P51508 661 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 PPP3R1P63098 170 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 MADCAM1Q13477 382 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 CDH18Q13634 790 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 ABRAXAS2Q15018 415 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 FAM187BQ17R55 369 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 SLC39A12Q504Y0 691 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 ZNF628Q5EBL2 1059 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 C9orf152Q5JTZ5 239 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 MRNIPQ6NTE8 343 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 FBXO46Q6PJ61 603 aaPredicted RBP7.13□□□□□ -1.27
SOX6-208ENST00000527619 PAQR3Q6TCH7 311 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 ABI3BPQ7Z7G0 1075 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 ARHGAP12Q8IWW6 846 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 KRTCAP2Q8N6L1 136 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 WDSUB1Q8N9V3 476 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 NAXEQ8NCW5 288 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 TRPV1Q8NER1 839 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 OR9Q1Q8NGQ5 310 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 BRI3BPQ8WY22 251 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 ESAMQ96AP7 390 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 WBP1Q96G27 269 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 CLUHP3Q96NS8 147 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 TMEM43Q9BTV4 400 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 PARD6GQ9BYG4 376 aaPredicted RBP7.13□□□□□ -1.27
SOX6-208ENST00000527619 REG4Q9BYZ8 158 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 PRDM5Q9NQX1 630 aaPredicted RBP7.13□□□□□ -1.27
SOX6-208ENST00000527619 DDIT4Q9NX09 232 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 NDUFB11Q9NX14 153 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 SDHAF2Q9NX18 166 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 NDUFAF4Q9P032 175 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 NDRG3Q9UGV2 375 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 POFUT2Q9Y2G5 429 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 LSM2Q9Y333 95 aaKnown RBP7.13□□□□□ -1.27
SOX6-208ENST00000527619 RNF215Q9Y6U7 377 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 ZBTB42B2RXF5 422 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 KRBOX1C9JBD0 128 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 NEDD8-MDP1E9PL57 170 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 H0YIV9 168 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 SGK494L7N484 410 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 DDNO94850 711 aaPredicted RBP7.13□□□□□ -1.27
SOX6-208ENST00000527619 LY86O95711 162 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 TBX18O95935 607 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 ASGR2P07307 311 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 ADRB1P08588 477 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 HCKP08631 526 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 OR56A5P0C7T3 313 aa7.13□□□□□ -1.27
SOX6-208ENST00000527619 PIPP12273 146 aaPredicted RBP7.13□□□□□ -1.27
SOX6-208ENST00000527619 UBA1P22314 1058 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms