RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 DKK1O94907 266 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 ETFAP13804 333 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 UQCRC2P22695 453 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 SOAT1P35610 550 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 AVPR1BP47901 424 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 ARSFP54793 590 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 MAT1AQ00266 395 aaKnown RBP17.64■□□□□ 0.42
SMPD1-203ENST00000527275 TBPL2Q6SJ96 375 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 GALNT10Q86SR1 603 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 CHERPQ8IWX8 916 aaKnown RBP17.64■□□□□ 0.42
SMPD1-203ENST00000527275 C11orf65Q8NCR3 313 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 MAGEE2Q8TD90 523 aaPredicted RBP17.64■□□□□ 0.42
SMPD1-203ENST00000527275 TFAP2CQ92754 450 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 ZNF764Q96H86 408 aaPredicted RBP17.64■□□□□ 0.42
SMPD1-203ENST00000527275 CSF3RQ99062 836 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 FAIM2Q9BWQ8 316 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 LYRM4Q9HD34 91 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 SLAMF7Q9NQ25 335 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 HCN3Q9P1Z3 774 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 CLCA2Q9UQC9 943 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 FER1L5A0AVI2 2057 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 PGRMC2O15173 223 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 CHST10O43529 356 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 SCRG1O75711 98 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 KRT75O95678 551 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 CDK4P11802 303 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 DRD2P14416 443 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 ITIH1P19827 911 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 CPN2P22792 545 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 OR1D4P47884 311 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 PCBP4P57723 403 aaKnown RBP17.64■□□□□ 0.41
SMPD1-203ENST00000527275 TXNL4AP83876 142 aaKnown RBP17.64■□□□□ 0.41
SMPD1-203ENST00000527275 SYT16Q17RD7 645 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 NIPAL1Q6NVV3 410 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 CBLL1Q75N03 491 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 CA13Q8N1Q1 262 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 EXOSC8Q96B26 276 aaKnown RBP17.64■□□□□ 0.41
SMPD1-203ENST00000527275 MVB12AQ96EY5 273 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 NPLQ9BXD5 320 aaPredicted RBP17.64■□□□□ 0.41
SMPD1-203ENST00000527275 SLC7A5P2Q9GIP4 190 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 RAD21L1Q9H4I0 556 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 CXorf36Q9H7Y0 433 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 AKAP7Q9P0M2 348 aaPredicted RBP17.64■□□□□ 0.41
SMPD1-203ENST00000527275 PHF11Q9UIL8 331 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 MAP4K5Q9Y4K4 846 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 SNX8Q9Y5X2 465 aa17.64■□□□□ 0.41
SMPD1-203ENST00000527275 DPPA5A6NC42 116 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 H0YIG0 161 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 TNFRSF21O75509 655 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 FGF5P12034 268 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 PCGF2P35227 344 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 BUD31P41223 144 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-203ENST00000527275 SHC2P98077 582 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 MC2RQ01718 297 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 FADDQ13158 208 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 OTUD3Q5T2D3 398 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-203ENST00000527275 C1orf189Q5VU69 101 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 YOD1Q5VVQ6 348 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-203ENST00000527275 EIF3MQ7L2H7 374 aaKnown RBP17.63■□□□□ 0.41
SMPD1-203ENST00000527275 RAB11FIP2Q7L804 512 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 BPHLQ86WA6 291 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-203ENST00000527275 RNF130Q86XS8 419 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 PMEPA1Q969W9 287 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 MYCBPQ99417 103 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-203ENST00000527275 FBXO8Q9NRD0 319 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 MS4A12Q9NXJ0 267 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 SRPK3Q9UPE1 567 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 LOXL2Q9Y4K0 774 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 A0A1B0GX78 115 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 FAM227AF5H4B4 570 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 TMX2-CTNND1H3BSU7 103 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 NR2F6P10588 404 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 CEACAM1P13688 526 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 FRKP42685 505 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-203ENST00000527275 PRIM2P49643 509 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 TNFRSF17Q02223 184 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 MERTKQ12866 999 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.63■□□□□ 0.41
SMPD1-203ENST00000527275 GCNT6Q5T4J0 391 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 RHBDD2Q6NTF9 364 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 CARM1Q86X55 608 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 ZDHHC21Q8IVQ6 265 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-203ENST00000527275 DEPDC7Q96QD5 511 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 TMEM121BQ9BXQ6 578 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-203ENST00000527275 TAS2R7Q9NYW3 318 aa17.63■□□□□ 0.41
SMPD1-203ENST00000527275 PMS2P1A4D2B8 440 aa17.62■□□□□ 0.41
SMPD1-203ENST00000527275 CYR61O00622 381 aa17.62■□□□□ 0.41
SMPD1-203ENST00000527275 DSCR3O14972 297 aa17.62■□□□□ 0.41
SMPD1-203ENST00000527275 MAGEA2P43356 314 aa17.62■□□□□ 0.41
SMPD1-203ENST00000527275 NOVA1P51513 510 aaKnown RBP17.62■□□□□ 0.41
SMPD1-203ENST00000527275 RBBP4Q09028 425 aa17.62■□□□□ 0.41
SMPD1-203ENST00000527275 ZDHHC13Q8IUH4 622 aa17.62■□□□□ 0.41
SMPD1-203ENST00000527275 ZBED6CLQ96FA7 236 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-203ENST00000527275 ADI1Q9BV57 179 aa17.62■□□□□ 0.41
SMPD1-203ENST00000527275 EPS8L2Q9H6S3 715 aa17.62■□□□□ 0.41
SMPD1-203ENST00000527275 SLC39A1Q9NY26 324 aa17.62■□□□□ 0.41
SMPD1-203ENST00000527275 SMPD3Q9NY59 655 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-203ENST00000527275 EHD3Q9NZN3 535 aa17.62■□□□□ 0.41
SMPD1-203ENST00000527275 G3V2T6 193 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms