RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 TRMUO75648 421 aaKnown RBP3.88□□□□□ -1.79
CSDE1-211ENST00000525970 TOXO94900 526 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 MBD3O95983 291 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 FHP07954 510 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 TIMP3P35625 211 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 MATKP42679 507 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 ZFP36L2P47974 494 aaKnown RBP3.88□□□□□ -1.79
CSDE1-211ENST00000525970 CDKN3Q16667 212 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 GTDC1Q4AE62 458 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 LINC01620Q4KN68 170 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 RFTN2Q52LD8 501 aaPredicted RBP3.88□□□□□ -1.79
CSDE1-211ENST00000525970 NEPROQ6NW34 567 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 ASRGL1Q7L266 308 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 LPCAT2Q7L5N7 544 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 APLFQ8IW19 511 aaPredicted RBP3.88□□□□□ -1.79
CSDE1-211ENST00000525970 LSMEM2Q8N112 164 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 RELL2Q8NC24 303 aaPredicted RBP3.88□□□□□ -1.79
CSDE1-211ENST00000525970 SMAP2Q8WU79 429 aaPredicted RBP3.88□□□□□ -1.79
CSDE1-211ENST00000525970 TCP11Q8WWU5 503 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 LIPHQ8WWY8 451 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 VSTM2LQ96N03 204 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 VPS35Q96QK1 796 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 PSKH2Q96QS6 385 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 ZNF607Q96SK3 696 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 MMP28Q9H239 520 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 SLC25A19Q9HC21 320 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 C2orf42Q9NWW7 574 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 PLCL2Q9UPR0 1127 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 STK36Q9NRP7 1315 aa3.88□□□□□ -1.79
CSDE1-211ENST00000525970 PTCH1Q13635 1447 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 OR5H15A6NDH6 313 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 C15orf61A6NNL5 157 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 TCP10L2B9ZVM9 353 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 AP3B1O00203 1094 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 NTN3O00634 580 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-211ENST00000525970 MTX2O75431 263 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 ANXA9O76027 345 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 RHOBTB1O94844 696 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 UFL1O94874 794 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 LYNP07948 512 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 CD48P09326 243 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 RPA2P15927 270 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 SELEP16581 610 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 GPR183P32249 361 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 PGFP49763 221 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 HILS1P60008 231 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 HERVK_113P63132 956 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 ERVK-8P63133 956 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 EXOSC2Q13868 293 aaKnown RBP3.87□□□□□ -1.79
CSDE1-211ENST00000525970 HAGHQ16775 308 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 PARP6Q2NL67 630 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 HKDC1Q2TB90 917 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 FAM53AQ6NSI3 398 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-211ENST00000525970 STEAP1BQ6NZ63 245 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 ZNF730Q6ZMV8 503 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 SH2D5Q6ZV89 423 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 CCDC36Q8IYA8 594 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 LINC00518Q8N0U6 118 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 RLN3Q8WXF3 142 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 SLCO2A1Q92959 643 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 LRR1Q96L50 414 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 OVOL2Q9BRP0 275 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 TCHPQ9BT92 498 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 ALG12Q9BV10 488 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 ERVK-6Q9BXR3 956 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 PUS3Q9BZE2 481 aaKnown RBP3.87□□□□□ -1.79
CSDE1-211ENST00000525970 HOXD1Q9GZZ0 328 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 C3orf14Q9HBI5 128 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 ZNF334Q9HCZ1 680 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-211ENST00000525970 TRPV5Q9NQA5 729 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 MBD2Q9UBB5 411 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 TUBGCP4Q9UGJ1 667 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 RNF215Q9Y6U7 377 aa3.87□□□□□ -1.79
CSDE1-211ENST00000525970 SYNJ2O15056 1496 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 LOC390937A0A1W2PQ73 354 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 MBLAC1A4D2B0 266 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-211ENST00000525970 FBLL1A6NHQ2 334 aaKnown RBP3.86□□□□□ -1.79
CSDE1-211ENST00000525970 WASH3PC4AMC7 463 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 H3BTX0 84 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 IMPA2O14732 288 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 CTAGE5O15320 804 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 NUDT21O43809 227 aaKnown RBP3.86□□□□□ -1.79
CSDE1-211ENST00000525970 SP1P08047 785 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 PRSS56P0CW18 603 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 MBL2P11226 248 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-211ENST00000525970 CEBPBP17676 345 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 ATP6V1C1P21283 382 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 DLSTP36957 453 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 TAGLN2P37802 199 aaKnown RBP3.86□□□□□ -1.79
CSDE1-211ENST00000525970 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-211ENST00000525970 MTF1Q14872 753 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 SLC17A1Q14916 467 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 OTUD3Q5T2D3 398 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-211ENST00000525970 FBXL22Q6P050 247 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 LEG1Q6P5S2 330 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 WASH2PQ6VEQ5 465 aa3.86□□□□□ -1.79
CSDE1-211ENST00000525970 RANBP3LQ86VV4 465 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-211ENST00000525970 GPBP1Q86WP2 473 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms