RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 C10orf111Q8N326 155 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 CPSF7Q8N684 471 aaKnown RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 POU5F2Q8N7G0 328 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 ZNF615Q8N8J6 731 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 APCDD1LQ8NCL9 501 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 ZNF721Q8TF20 911 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 STON2Q8WXE9 905 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 PSMF1Q92530 271 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 TANKQ92844 425 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 PPCDCQ96CD2 204 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 METTL2AQ96IZ6 378 aaKnown RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 MAGED4Q96JG8 741 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 LMF1Q96S06 567 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 CCDC106Q9BWC9 280 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 GPR87Q9BY21 358 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 DPY30Q9C005 99 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 ZNF700Q9H0M5 742 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 SERHL2Q9H4I8 314 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 CXorf36Q9H7Y0 433 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 CXorf21Q9HAI6 301 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 ZBTB20Q9HC78 741 aaPredicted RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 SEMA3GQ9NS98 782 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 ARL8BQ9NVJ2 186 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 TAS2R7Q9NYW3 318 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 ZNF639Q9UID6 485 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 EIF3LQ9Y262 564 aaKnown RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 MMACHCQ9Y4U1 282 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 DOCK10Q96BY6 2186 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 USP24Q9UPU5 2620 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 A0A088AWK7 358 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 A0A1W2PQ72 361 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 SAGE2PA6NJ88 616 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 A6NL46 340 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 CAPN14A8MX76 684 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 C17orf105B2RV13 164 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 K7ENP7 123 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 NR5A2O00482 541 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 PDPK1O15530 556 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 SLC22A3O75751 556 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 CPSF4O95639 269 aaKnown RBP6.03□□□□□ -1.44
CD44-214ENST00000525211 IGKV3-11P04433 115 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 IFNA16P05015 189 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 SLC35E2P0CK97 266 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 PORP16435 677 aaPredicted RBP6.03□□□□□ -1.44
CD44-214ENST00000525211 ZNF16P17020 682 aaPredicted RBP6.03□□□□□ -1.44
CD44-214ENST00000525211 ZNF10P21506 573 aaPredicted RBP6.03□□□□□ -1.44
CD44-214ENST00000525211 NT5EP21589 574 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 JAK1P23458 1154 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 MC3RP41968 323 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 ATP4BP51164 291 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 NCBP2P52298 156 aaKnown RBP eCLIP6.03□□□□□ -1.44
CD44-214ENST00000525211 POLR2JP52435 117 aaKnown RBP6.03□□□□□ -1.44
CD44-214ENST00000525211 HBA1P69905 142 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 ACTN3Q08043 901 aaPredicted RBP6.03□□□□□ -1.44
CD44-214ENST00000525211 HSPB3Q12988 150 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 HEPACAMQ14CZ8 416 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 GSTA3Q16772 222 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 COL28A1Q2UY09 1125 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 LINC00303Q3SY05 128 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 TIGD2Q4W5G0 525 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 ZNF468Q5VIY5 522 aaPredicted RBP6.03□□□□□ -1.44
CD44-214ENST00000525211 INO80CQ6PI98 192 aaPredicted RBP6.03□□□□□ -1.44
CD44-214ENST00000525211 PCSK4Q6UW60 755 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 TMEM107Q6UX40 140 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 TMEM64Q6YI46 380 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 IKBIPQ70UQ0 350 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 CPLX4Q7Z7G2 160 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 C9orf40Q8IXQ3 194 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 OR5AK3PQ8NH89 298 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 FBXO27Q8NI29 283 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 FBXO30Q8TB52 745 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 SLC2A12Q8TD20 617 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 THAP3Q8WTV1 239 aaPredicted RBP6.03□□□□□ -1.44
CD44-214ENST00000525211 NCLNQ969V3 563 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 CTHRC1Q96CG8 243 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 GIMAP5Q96F15 307 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 AURKBQ96GD4 344 aaPredicted RBP6.03□□□□□ -1.44
CD44-214ENST00000525211 C16orf58Q96GQ5 468 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 SENP5Q96HI0 755 aaPredicted RBP6.03□□□□□ -1.44
CD44-214ENST00000525211 YIPF4Q9BSR8 244 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 DUSP26Q9BV47 211 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 CNPPD1Q9BV87 410 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 FAIM2Q9BWQ8 316 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 DPH1Q9BZG8 443 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 PAIP1Q9H074 479 aaKnown RBP6.03□□□□□ -1.44
CD44-214ENST00000525211 IKZF5Q9H5V7 419 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 EPS8L2Q9H6S3 715 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 MS4A12Q9NXJ0 267 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 SLC25A37Q9NYZ2 338 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 EHD3Q9NZN3 535 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 ZIM2Q9NZV7 527 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 CCDC167Q9P0B6 97 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 KCND3Q9UK17 655 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 USP22Q9UPT9 525 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 ERVK-19Q9WJR5 959 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 CSAG2Q9Y5P2 127 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 KCNE3Q9Y6H6 103 aa6.03□□□□□ -1.44
CD44-214ENST00000525211 BSNQ9UPA5 3926 aa6.02□□□□□ -1.45
CD44-214ENST00000525211 LOC100653049A0A140TA62 436 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms