RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 HSD17B14Q9BPX1 270 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 FTHL17Q9BXU8 183 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 ATG10Q9H0Y0 220 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 CXXC4Q9H2H0 198 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 LIME1Q9H400 295 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 TAS2R16Q9NYV7 291 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 TUBGCP4Q9UGJ1 667 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 DNPEPQ9ULA0 475 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 ANKRD30AQ9BXX3 1397 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 RAB3GAP2Q9H2M9 1393 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 PLEKHH2Q8IVE3 1493 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 MAGI3Q5TCQ9 1506 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 KIF14Q15058 1648 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 PTPN23Q9H3S7 1636 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 TRBV5-4A0A0C4DH59 114 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 A0A1B0GTH9 108 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 ZNF724A8MTY0 619 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 EI24O14681 340 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 ARPC1BO15143 372 aaKnown RBP3.2□□□□□ -1.9
SKP1-212ENST00000523966 PDGFBP01127 241 aaPredicted RBP3.2□□□□□ -1.9
SKP1-212ENST00000523966 MT-ND1P03886 318 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 OR9G9P0C7N8 305 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 RALAP11233 206 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 SELEP16581 610 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 IL10P22301 178 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 LMO2P25791 158 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 MAPK3P27361 379 aaPredicted RBP3.2□□□□□ -1.9
SKP1-212ENST00000523966 NDST1P52848 882 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 YBEYP58557 167 aaPredicted RBP3.2□□□□□ -1.9
SKP1-212ENST00000523966 RPS4XP62701 263 aaKnown RBP3.2□□□□□ -1.9
SKP1-212ENST00000523966 CD300CQ08708 224 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 KLF5Q13887 457 aaPredicted RBP3.2□□□□□ -1.9
SKP1-212ENST00000523966 GAMTQ14353 236 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 HAGHQ16775 308 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 POM121L1PQ3SYA9 428 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 GLIPR1L2Q4G1C9 344 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 CCDC92Q53HC0 331 aaPredicted RBP3.2□□□□□ -1.9
SKP1-212ENST00000523966 TCHHL1Q5QJ38 904 aaPredicted RBP3.2□□□□□ -1.9
SKP1-212ENST00000523966 SEL1L3Q68CR1 1132 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 OR6B2Q6IFH4 312 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 EMBQ6PCB8 327 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 ABRAXAS1Q6UWZ7 409 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 WDR88Q6ZMY6 472 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 ZNF841Q6ZN19 808 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 RPAINQ86UA6 219 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 GTSCR1Q86UQ5 136 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 ITIH5Q86UX2 942 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 LUZP1Q86V48 1076 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 PYROXD2Q8N2H3 581 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 HDDC3Q8N4P3 179 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 TMEM37Q8WXS4 190 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 PHYHIPQ92561 330 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 PNPLA2Q96AD5 504 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 TMEM186Q96B77 213 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 C1orf21Q9H246 121 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 CIDEBQ9UHD4 219 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 SLC6A5Q9Y345 797 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 FBXO7Q9Y3I1 522 aa3.2□□□□□ -1.9
SKP1-212ENST00000523966 KIAA1107Q9UPP5 1409 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 ADCY10Q96PN6 1610 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 LRRIQ1Q96JM4 1722 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 TEX48A0A1B0GUV7 120 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 EPM2AB3EWF7 344 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 RASGRF2O14827 1237 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 IGHV3-13P01766 116 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 FCGR3AP08637 254 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 ETS1P14921 441 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 HSPA1LP34931 641 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 ASMTP46597 345 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 RPL34P49207 117 aaKnown RBP3.19□□□□□ -1.9
SKP1-212ENST00000523966 CCL11P51671 97 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 SLC8A3P57103 927 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 NLRP11P59045 1033 aaKnown RBP3.19□□□□□ -1.9
SKP1-212ENST00000523966 NOP14P78316 857 aaKnown RBP3.19□□□□□ -1.9
SKP1-212ENST00000523966 MYBPC1Q00872 1141 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 BNIP1Q12981 228 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 MSLNQ13421 630 aaPredicted RBP3.19□□□□□ -1.9
SKP1-212ENST00000523966 SIX1Q15475 284 aaPredicted RBP3.19□□□□□ -1.9
SKP1-212ENST00000523966 CLPPQ16740 277 aaPredicted RBP3.19□□□□□ -1.9
SKP1-212ENST00000523966 HKDC1Q2TB90 917 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 TEX35Q5T0J7 233 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 IL23RQ5VWK5 629 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 REP15Q6BDI9 236 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 ARMCX5Q6P1M9 558 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 TATDN1Q6P1N9 297 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 NEK5Q6P3R8 708 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 GPRIN3Q6ZVF9 776 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 GPR142Q7Z601 462 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 YRDCQ86U90 279 aaKnown RBP3.19□□□□□ -1.9
SKP1-212ENST00000523966 SLC25A42Q86VD7 318 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 LRRC49Q8IUZ0 686 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 PHC2Q8IXK0 858 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 LMNTD2Q8IXW0 634 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 RELL2Q8NC24 303 aaPredicted RBP3.19□□□□□ -1.9
SKP1-212ENST00000523966 OR52E1Q8NGJ3 308 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 FCGR1BQ92637 280 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 TOMM40LQ969M1 308 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 TMEM45BQ96B21 275 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 DEFB118Q96PH6 123 aa3.19□□□□□ -1.9
SKP1-212ENST00000523966 SOSTQ9BQB4 213 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms