RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 OR4F21O95013 312 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 RALAP11233 206 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 EZRP15311 586 aaKnown RBP2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 FOSL2P15408 326 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 DPP4P27487 766 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 SOX6P35712 828 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 CSRP3P50461 194 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 RPS27AP62979 156 aaKnown RBP2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 HSF2Q03933 536 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 TMEM187Q14656 261 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 MLF2Q15773 248 aaPredicted RBP2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 FAM189A2Q15884 450 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 HAGHQ16775 308 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 KNOP1Q1ED39 458 aaKnown RBP2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 SGSM1Q2NKQ1 1148 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 HKDC1Q2TB90 917 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 LINC01620Q4KN68 170 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 RFTN2Q52LD8 501 aaPredicted RBP2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 C1orf189Q5VU69 101 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 SULT1C3Q6IMI6 304 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 STEAP1BQ6NZ63 245 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 LEG1Q6P5S2 330 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 AFTPHQ6ULP2 937 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF730Q6ZMV8 503 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 KIF6Q6ZMV9 814 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 DPY19L2P2Q6ZN68 376 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 PPP1R42Q7Z4L9 355 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 HSCBQ8IWL3 235 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 CCDC36Q8IYA8 594 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 TBC1D21Q8IYX1 336 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 OR6F1Q8NGZ6 308 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 OR2T3Q8NH03 318 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 SLC5A11Q8WWX8 675 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 WRAP53Q9BUR4 548 aaKnown RBP2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 FICDQ9BVA6 458 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 ST6GALNAC5Q9BVH7 336 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 RAB33BQ9H082 229 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 MED20Q9H944 212 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 FGF22Q9HCT0 170 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 AGPAT5Q9NUQ2 364 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 EXTL2Q9UBQ6 330 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 TUBGCP4Q9UGJ1 667 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 LAMP5Q9UJQ1 280 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 NIP7Q9Y221 180 aaKnown RBP eCLIP2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 EHBP1L1Q8N3D4 1523 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 ABCA10Q8WWZ4 1543 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 CLSPNQ9HAW4 1339 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 CNTNAP2Q9UHC6 1331 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 ADAMTS12P58397 1594 aa2.86□□□□□ -1.95
HMGN1P28-201ENST00000521340 ITSN2Q9NZM3 1697 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 ARHGEF11O15085 1522 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 TOPBP1Q92547 1522 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 KDM5BQ9UGL1 1544 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 LOC105371242A0A075B767 164 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 ASB14A6NK59 587 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 ARHGEF33A8MVX0 844 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 PRSS44E7EML9 344 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 PDLIM1O00151 329 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 MAGEC1O60732 1142 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 MTRF1O75570 445 aaKnown RBP2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 RPLP0P05388 317 aaKnown RBP2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 IQCF3P0C7M6 154 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 TSPY4P0CV99 314 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 TSPY10P0CW01 314 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 KRT13P13646 458 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 PTGFRP43088 359 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 SLC1A6P48664 564 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 NDST2P52849 883 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 METAP1P53582 386 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 CYCSP99999 105 aaKnown RBP2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 OVGP1Q12889 678 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 RAPSNQ13702 412 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 UPP1Q16831 310 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 HLA-BQ31612 363 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 TMEM52BQ4KMG9 183 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 LINC00242Q5T6M2 205 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 CBLN3Q6UW01 205 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 Q71RC1 249 aaPredicted RBP2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 ERASQ7Z444 233 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 GOLGA7Q7Z5G4 137 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZFAND4Q86XD8 727 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 CBWD2Q8IUF1 395 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 CCDC71Q8IV32 467 aaPredicted RBP2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 LINC00518Q8N0U6 118 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 GCNT2Q8N0V5 402 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 SPEM1Q8N4L4 309 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 RDH11Q8TC12 318 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 TCP11Q8WWU5 503 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 OSTF1Q92882 214 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 DLX4Q92988 240 aaPredicted RBP2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 VPS39Q96JC1 886 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 CPXM1Q96SM3 734 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 NT5C3AQ9H0P0 336 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 WDR13Q9H1Z4 485 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 RWDD1Q9H446 243 aaPredicted RBP2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 ALG9Q9H6U8 611 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 DCTPP1Q9H773 170 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 Q9HAA7 133 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 PLEKHA3Q9HB20 300 aa2.85□□□□□ -1.95
HMGN1P28-201ENST00000521340 C3orf14Q9HBI5 128 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms