RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 ALOX5P09917 674 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 GPR89BP0CG08 455 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 AZGP1P25311 298 aaKnown RBP9.61□□□□□ -0.87
MCF2-209ENST00000520602 DCKP27707 260 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 GGT2P36268 569 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 FAM214AQ32MH5 1076 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 OR2L8Q8NGY9 312 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 GRHL3Q8TE85 626 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 TSSK6Q9BXA6 273 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 LMAN2LQ9H0V9 348 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 C1GALT1Q9NS00 363 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 TRNAU1APQ9NX07 287 aaKnown RBP9.61□□□□□ -0.87
MCF2-209ENST00000520602 ZSCAN32Q9NX65 697 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 SPIN1Q9Y657 262 aaPredicted RBP9.61□□□□□ -0.87
MCF2-209ENST00000520602 FAAHO00519 579 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 NPC1O15118 1278 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 DYRK3O43781 588 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 SCN2BO60939 215 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 AIFM1O95831 613 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 SOD1P00441 154 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 IGFALSP35858 605 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 RPL4P36578 427 aaKnown RBP9.61□□□□□ -0.87
MCF2-209ENST00000520602 SLC19A1P41440 591 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 SRP54P61011 504 aaKnown RBP9.61□□□□□ -0.87
MCF2-209ENST00000520602 NNATQ16517 81 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 FRMPD2BQ6IN97 320 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 CDC73Q6P1J9 531 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 HSDL2Q6YN16 418 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 BBS10Q8TAM1 723 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 MRPL38Q96DV4 380 aaKnown RBP9.61□□□□□ -0.87
MCF2-209ENST00000520602 TBX5Q99593 518 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 OR51V1Q9H2C8 321 aa9.61□□□□□ -0.87
MCF2-209ENST00000520602 PAK1IP1Q9NWT1 392 aaPredicted RBP9.61□□□□□ -0.87
MCF2-209ENST00000520602 TMEFF2Q9UIK5 374 aaPredicted RBP9.61□□□□□ -0.87
MCF2-209ENST00000520602 PCYT1BQ9Y5K3 369 aaPredicted RBP9.61□□□□□ -0.87
MCF2-209ENST00000520602 MYLKQ15746 1914 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 LRIT2A6NDA9 550 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 CEACAM5P06731 702 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 ITIH1P19827 911 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 ATP5A1P25705 553 aaKnown RBP9.6□□□□□ -0.87
MCF2-209ENST00000520602 RPS15AP62244 130 aaKnown RBP9.6□□□□□ -0.87
MCF2-209ENST00000520602 ST3GAL3Q11203 375 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 SLC35F1Q5T1Q4 408 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 FIGNL1Q6PIW4 674 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 RNF165Q6ZSG1 346 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 DGLUCYQ7Z3D6 616 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 CACTIN-AS1Q8N1I8 211 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 GHDCQ8N2G8 530 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 LRRC25Q8N386 305 aaPredicted RBP9.6□□□□□ -0.87
MCF2-209ENST00000520602 AMER3Q8N944 861 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 OR52P1PQ8NH57 321 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 SUN3Q8TAQ9 357 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 KLHDC7BQ96G42 594 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 MGLLQ99685 303 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 OCEL1Q9H607 264 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 TMEM27Q9HBJ8 222 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 KLHL1Q9NR64 748 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 OR6C2Q9NZP2 312 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 PADI2Q9Y2J8 665 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 GSTK1Q9Y2Q3 226 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 GPR52Q9Y2T5 361 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 LOC110117498-PIK3R3F6TDL0 507 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 CBFA2T3O75081 653 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 LDB3O75112 727 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 GADD45AP24522 165 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 TMED10P49755 219 aaKnown RBP9.6□□□□□ -0.87
MCF2-209ENST00000520602 BLKP51451 505 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 SHC2P98077 582 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 MAP4K2Q12851 820 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 LTB4RQ15722 352 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 AMZ1Q400G9 498 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 USP51Q70EK9 711 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 LAPTM4BQ86VI4 370 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 RANBP3LQ86VV4 465 aaPredicted RBP9.6□□□□□ -0.87
MCF2-209ENST00000520602 ENTHD1Q8IYW4 607 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 OR2A1Q8NGT9 310 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 PATE1Q8WXA2 126 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 NCSTNQ92542 709 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 TBC1D17Q9HA65 648 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 ACOT13Q9NPJ3 140 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 LYARQ9NX58 379 aaKnown RBP9.6□□□□□ -0.87
MCF2-209ENST00000520602 SIRT5Q9NXA8 310 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 PTGFRNQ9P2B2 879 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 PCDHGA10Q9Y5H3 936 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 C2orf74A8MZ97 194 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 ZNF701M0R085 212 aaPredicted RBP9.6□□□□□ -0.87
MCF2-209ENST00000520602 BSGP35613 385 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 OPRL1P41146 370 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 SMSP52788 366 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 CCNJQ5T5M9 372 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 KIAA0907Q7Z7F0 614 aaPredicted RBP9.6□□□□□ -0.87
MCF2-209ENST00000520602 FBXL6Q8N531 539 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 B3GNT7Q8NFL0 401 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 NEURL3Q96EH8 262 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 AMDHD1Q96NU7 426 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 TAS2R16Q9NYV7 291 aa9.6□□□□□ -0.87
MCF2-209ENST00000520602 ZFR2Q9UPR6 939 aaKnown RBP9.6□□□□□ -0.87
MCF2-209ENST00000520602 A8MUA0 341 aa9.59□□□□□ -0.87
MCF2-209ENST00000520602 CLDN4O14493 209 aa9.59□□□□□ -0.87
MCF2-209ENST00000520602 THEGLP0DJG4 465 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms