RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 ZNF675Q8TD23 568 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 PTPMT1Q8WUK0 201 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-205ENST00000518196 NUDT8Q8WV74 236 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 OR5P2Q8WZ92 322 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 IMMP1LQ96LU5 166 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 AMDHD1Q96NU7 426 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 OR52E6Q96RD3 313 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 WDR77Q9BQA1 342 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-205ENST00000518196 MESP1Q9BRJ9 268 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 ZNF385DQ9H6B1 395 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 CPNE5Q9HCH3 593 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 SAR1AQ9NR31 198 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.11□□□□□ -0.47
PABPC1-205ENST00000518196 FAM120CQ9NX05 1096 aaKnown RBP12.11□□□□□ -0.47
PABPC1-205ENST00000518196 COPS7AQ9UBW8 275 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 ZNF232Q9UNY5 417 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 FREM2Q5SZK8 3169 aa12.11□□□□□ -0.47
PABPC1-205ENST00000518196 NUP214P35658 2090 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-205ENST00000518196 PRSS51A0A1B0GVH4 220 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 DYTNA2CJ06 578 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 ARGFXA6NJG6 315 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 C9JVG2 144 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 RNASET2O00584 256 aaKnown RBP12.1□□□□□ -0.47
PABPC1-205ENST00000518196 NDUFAB1O14561 156 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 BCAS2O75934 225 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-205ENST00000518196 PGRP06401 933 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 CLCN2P51788 898 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 DGKQP52824 942 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 CXADRP78310 365 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 HSPB3Q12988 150 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 AIMP2Q13155 320 aaKnown RBP12.1□□□□□ -0.47
PABPC1-205ENST00000518196 PRICKLE4Q2TBC4 344 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 PLAG1Q6DJT9 500 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 DGAT2L6Q6ZPD8 337 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 MSANTD1Q6ZTZ1 278 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 ZNF551Q7Z340 670 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-205ENST00000518196 MTDHQ86UE4 582 aaKnown RBP12.1□□□□□ -0.47
PABPC1-205ENST00000518196 KBTBD2Q8IY47 623 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 VWA5B2Q8N398 1253 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 ANKS4BQ8N8V4 417 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 CCDC197Q8NCU1 140 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 NFAM1Q8NET5 270 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-205ENST00000518196 ADCY4Q8NFM4 1077 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 OR1N1Q8NGS0 311 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 OR9A2Q8NGT5 310 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 SUN3Q8TAQ9 357 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 SLC2A12Q8TD20 617 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 BCAS4Q8TDM0 211 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 NCLNQ969V3 563 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 ERP27Q96DN0 273 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 VMP1Q96GC9 406 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 SENP5Q96HI0 755 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-205ENST00000518196 FBXL20Q96IG2 436 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 CNPPD1Q9BV87 410 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 GRIP2Q9C0E4 1043 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 OR8D2Q9GZM6 311 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 NMUR2Q9GZQ4 415 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 RMND5AQ9H871 391 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 SLAMF7Q9NQ25 335 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 MAT2BQ9NZL9 334 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 PPIEQ9UNP9 301 aaKnown RBP12.1□□□□□ -0.47
PABPC1-205ENST00000518196 CEP295Q9C0D2 2601 aa12.1□□□□□ -0.47
PABPC1-205ENST00000518196 FRYQ5TBA9 3013 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 CCDC154A6NI56 674 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 TTLL8A6PVC2 850 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 PLOD2O00469 737 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 NR5A2O00482 541 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 FCHO1O14526 889 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 SLC22A2O15244 555 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 DCTN3O75935 186 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 CPSF4O95639 269 aaKnown RBP12.09□□□□□ -0.47
PABPC1-205ENST00000518196 DDAH2O95865 285 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 C6orf47O95873 294 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 IFI6P09912 130 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 CT62P0C5K7 136 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 EFNA1P20827 205 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-205ENST00000518196 ZFP36L2P47974 494 aaKnown RBP12.09□□□□□ -0.47
PABPC1-205ENST00000518196 WNT3P56703 355 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 FUT7Q11130 342 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 KLF10Q13118 480 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 UBAP2LQ14157 1087 aaKnown RBP12.09□□□□□ -0.47
PABPC1-205ENST00000518196 MAPRE2Q15555 327 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 LTB4RQ15722 352 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 ZNF628Q5EBL2 1059 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 IRAK1BP1Q5VVH5 260 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 FAM111BQ6SJ93 734 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 FUNDC1Q8IVP5 155 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 OR7G1Q8NGA0 311 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 RNF217Q8TC41 542 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 DOK4Q8TEW6 326 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 ZNF721Q8TF20 911 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 TSPEARQ8WU66 669 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 APOBEC4Q8WW27 367 aaKnown RBP12.09□□□□□ -0.47
PABPC1-205ENST00000518196 KAT2AQ92830 837 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 CTHRC1Q96CG8 243 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 SPDL1Q96EA4 605 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 CNTNAP3BQ96NU0 1288 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 CNTNAP3Q9BZ76 1288 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 ING2Q9H160 280 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 C3orf14Q9HBI5 128 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms