RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TMUB2Q71RG4 321 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 YRDCQ86U90 279 aaKnown RBP4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 LRRC49Q8IUZ0 686 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 SUMF1Q8NBK3 374 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 OR2L2Q8NH16 312 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 HIST1H2ACQ93077 130 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 TOMM40LQ969M1 308 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 TMEM45BQ96B21 275 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 TMEM186Q96B77 213 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 WBP1Q96G27 269 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 DEFB118Q96PH6 123 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 SPXQ9BT56 116 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 RBM24Q9BX46 236 aaKnown RBP4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 NLNQ9BYT8 704 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 ADGRL4Q9HBW9 690 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 HPS4Q9NQG7 708 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 TUBGCP4Q9UGJ1 667 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 MRPL11Q9Y3B7 192 aaKnown RBP4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 KLF2Q9Y5W3 355 aaPredicted RBP4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 AFF2P51816 1311 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 RPGRIP1LQ68CZ1 1315 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 RAD54L2Q9Y4B4 1467 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 A0A0A6YYD4 124 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 IGKV3D-20A0A0C4DH25 116 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 ARPC1BO15143 372 aaKnown RBP4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 PDGFBP01127 241 aaPredicted RBP4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 APRTP07741 180 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 CYP11B1P15538 503 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 GNSP15586 552 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 UCP1P25874 307 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 PRDX6P30041 224 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 TAF6P49848 677 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 SLC8A3P57103 927 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 SSTP61278 116 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 PKN2Q16513 984 aaKnown RBP4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 CDC37Q16543 378 aaPredicted RBP4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 VWA2Q5GFL6 755 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 REP15Q6BDI9 236 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 OR6B2Q6IFH4 312 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 ZNF619Q8N2I2 560 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 CHCHD4Q8N4Q1 142 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 TMEM37Q8WXS4 190 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 BIRC7Q96CA5 298 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 C1orf147Q96MC9 270 aaPredicted RBP4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 FOXN4Q96NZ1 517 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 PYGO2Q9BRQ0 406 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 CBWD1Q9BRT8 395 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 TTYH2Q9BSA4 534 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 NRN1Q9NPD7 142 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 RPS10P5Q9NQ39 176 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 STARD5Q9NSY2 213 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 RCOR3Q9P2K3 495 aaPredicted RBP4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 LHX3Q9UBR4 397 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 MIOXQ9UGB7 285 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 MLXQ9UH92 298 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 ZNF175Q9Y473 711 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 GPRASP1Q5JY77 1395 aa4.01□□□□□ -1.77
HMGCS1-207ENST00000514610 CFAP73A6NFT4 308 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 K7ERI5 159 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 E2F3O00716 465 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 MCF2LO15068 1137 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 PROS1P07225 676 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 CSRP3P50461 194 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 WASHC5Q12768 1159 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 AGKQ53H12 422 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 LINC00242Q5T6M2 205 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 ADAMTSL5Q6ZMM2 481 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 MOB2Q70IA6 237 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 TAF8Q7Z7C8 310 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 AMZ2Q86W34 360 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 ELMOD2Q8IZ81 293 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 LRRC17Q8N6Y2 441 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 LEMD2Q8NC56 503 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 OR8H1Q8NGG4 311 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 OR6T1Q8NGN1 323 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 TNMDQ9H2S6 317 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 SPASTQ9UBP0 616 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 SEC14L4Q9UDX3 406 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 NUDCQ9Y266 331 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 HCFC1P51610 2035 aa4□□□□□ -1.77
HMGCS1-207ENST00000514610 ARHGAP42A6NI28 874 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 ZNF354AO60765 605 aaPredicted RBP3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 CALML3P27482 149 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 SGSHP51688 502 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 CARTPTQ16568 116 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 ZNF699Q32M78 642 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 EIPR1Q53HC9 387 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 SEL1L2Q5TEA6 688 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 FAM219BQ5XKK7 198 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 NEK5Q6P3R8 708 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 MFSD7Q6UXD7 560 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 MIER3Q7Z3K6 550 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 CEACAM19Q7Z692 300 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 LUZP1Q86V48 1076 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 COLGALT1Q8NBJ5 622 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 ZNF397Q8NF99 534 aaPredicted RBP3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 PHYHIPQ92561 330 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 CCDC47Q96A33 483 aaKnown RBP3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 CPXM1Q96SM3 734 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms