RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 NPLQ9BXD5 320 aaPredicted RBP14.05□□□□□ -0.16
VCAN-211ENST00000513984 DDX18Q9NVP1 670 aaKnown RBP14.05□□□□□ -0.16
VCAN-211ENST00000513984 SIT1Q9Y3P8 196 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 NAALAD2Q9Y3Q0 740 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 SPACA6W5XKT8 324 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 J3KTA2 159 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 CYR61O00622 381 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 DCNP07585 359 aaKnown RBP14.04□□□□□ -0.16
VCAN-211ENST00000513984 CHRM4P08173 479 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 CPMP14384 443 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 ETS2P15036 469 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 YAP1P46937 504 aaKnown RBP14.04□□□□□ -0.16
VCAN-211ENST00000513984 HLCSP50747 726 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 TPD52P55327 224 aaPredicted RBP14.04□□□□□ -0.16
VCAN-211ENST00000513984 ISL1P61371 349 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 RBM48Q5RL73 367 aaKnown RBP14.04□□□□□ -0.16
VCAN-211ENST00000513984 BORAQ6PGQ7 559 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 CA13Q8N1Q1 262 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 DNAJC22Q8N4W6 341 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 CHDHQ8NE62 594 aaPredicted RBP14.04□□□□□ -0.16
VCAN-211ENST00000513984 KAT2AQ92830 837 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 C16orf58Q96GQ5 468 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 MS4A4EQ96PG1 132 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 OR7D2Q96RA2 312 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 SLC38A3Q99624 504 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 YIPF4Q9BSR8 244 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 GABARAPL3Q9BY60 117 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 RBM38Q9H0Z9 239 aaKnown RBP14.04□□□□□ -0.16
VCAN-211ENST00000513984 DUSP15Q9H1R2 295 aaPredicted RBP14.04□□□□□ -0.16
VCAN-211ENST00000513984 RIBC2Q9H4K1 309 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 PRDM6Q9NQX0 595 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 ACER3Q9NUN7 267 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 THEGQ9P2T0 379 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 SEC14L3Q9UDX4 400 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 FAM32AQ9Y421 112 aaKnown RBP14.04□□□□□ -0.16
VCAN-211ENST00000513984 HSPE1-MOB4S4R3N1 261 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 SLC9B1P1A6NJY1 282 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 PIAS2O75928 621 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 OR6B1O95007 311 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 ANXA8P13928 327 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 CSNK1EP49674 416 aaKnown RBP14.04□□□□□ -0.16
VCAN-211ENST00000513984 CD47Q08722 323 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 MICAQ29983 383 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 EXOC3L2Q2M3D2 409 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 CTU2Q2VPK5 515 aaKnown RBP14.04□□□□□ -0.16
VCAN-211ENST00000513984 PRTGQ2VWP7 1150 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 DEFB133Q30KQ1 61 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 DEFB110Q30KQ9 67 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 MCATQ8IVS2 390 aaKnown RBP14.04□□□□□ -0.16
VCAN-211ENST00000513984 OR2L13Q8N349 312 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 DEFB123Q8N688 67 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 SETD9Q8NE22 299 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 OR7G2Q8NG99 324 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 OR10G2Q8NGC3 310 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 OTUB1Q96FW1 271 aaPredicted RBP14.04□□□□□ -0.16
VCAN-211ENST00000513984 TCTN2Q96GX1 697 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 MAP3K3Q99759 626 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 ACTRT3Q9BYD9 372 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 YIPF3Q9GZM5 350 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 PTGFRNQ9P2B2 879 aa14.04□□□□□ -0.16
VCAN-211ENST00000513984 CACNA1EQ15878 2313 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 A0A0G2JPF8 293 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 ARRDC5A6NEK1 342 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 HNRNPCL2B2RXH8 293 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 HNRNPCL3B7ZW38 293 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 SRPX2O60687 465 aaPredicted RBP14.03□□□□□ -0.16
VCAN-211ENST00000513984 HNRNPCL4P0DMR1 293 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 PORP16435 677 aaPredicted RBP14.03□□□□□ -0.16
VCAN-211ENST00000513984 CLK3P49761 638 aaKnown RBP14.03□□□□□ -0.16
VCAN-211ENST00000513984 RAB38P57729 211 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 SHC2P98077 582 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 RAPSNQ13702 412 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 C14orf28Q4W4Y0 310 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 C6orf141Q5SZD1 244 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 FAM111BQ6SJ93 734 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 TTC29Q8NA56 475 aaPredicted RBP14.03□□□□□ -0.16
VCAN-211ENST00000513984 OR5T3Q8NGG3 340 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 FEVQ99581 238 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 PITX2Q99697 317 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 SPATA5L1Q9BVQ7 753 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 ANKRA2Q9H9E1 313 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 STARD5Q9NSY2 213 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 NDRG4Q9ULP0 352 aaKnown RBP14.03□□□□□ -0.16
VCAN-211ENST00000513984 LIPT1Q9Y234 373 aa14.03□□□□□ -0.16
VCAN-211ENST00000513984 DSPPQ9NZW4 1301 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 BCAT2O15382 392 aaPredicted RBP14.02□□□□□ -0.16
VCAN-211ENST00000513984 SLITRK5O94991 958 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 GADD45GO95257 159 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 ATP1B1P05026 303 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 IFI6P09912 130 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 IL7RP16871 459 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 CRHBPP24387 322 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 SOX18P35713 384 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 AFF3P51826 1226 aaKnown RBP14.02□□□□□ -0.16
VCAN-211ENST00000513984 EPHA4P54764 986 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 C21orf59P57076 290 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 IL1RL1Q01638 556 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 DMWDQ09019 674 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 NPRL3Q12980 569 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 MEP1AQ16819 746 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms