RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 TMEM138Q9NPI0 162 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 DMRT3Q9NQL9 472 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 ACER3Q9NUN7 267 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 MRPL15Q9P015 296 aaKnown RBP14.14□□□□□ -0.15
USP38-202ENST00000510377 IL36AQ9UHA7 158 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 SESN1Q9Y6P5 492 aa14.14□□□□□ -0.15
USP38-202ENST00000510377 URB1O60287 2271 aaKnown RBP14.14□□□□□ -0.15
USP38-202ENST00000510377 ACP5P13686 325 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 ALAS2P22557 587 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 KELP23276 732 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 ACSL1P33121 698 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 CDK10Q15131 360 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 GPR19Q15760 415 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 PODNL1Q6PEZ8 512 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 WDR53Q7Z5U6 358 aaPredicted RBP14.13□□□□□ -0.15
USP38-202ENST00000510377 OVCA2Q8WZ82 227 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 SNX18Q96RF0 628 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 QRSL1Q9H0R6 528 aaKnown RBP14.13□□□□□ -0.15
USP38-202ENST00000510377 TXNL4BQ9NX01 149 aaKnown RBP14.13□□□□□ -0.15
USP38-202ENST00000510377 CXXC1Q9P0U4 656 aaPredicted RBP14.13□□□□□ -0.15
USP38-202ENST00000510377 RPS6KB2Q9UBS0 482 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 CSNK1G3Q9Y6M4 447 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 FAM86C2PA6NEL3 165 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 FAM183AA6NL82 134 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 ZNF821O75541 412 aaPredicted RBP14.13□□□□□ -0.15
USP38-202ENST00000510377 CD6P30203 668 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 CCR4P51679 360 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 CAP1Q01518 475 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 GRIN2CQ14957 1233 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 GGTA1PQ4G0N0 100 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 MEDAGQ5VYS4 303 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 FAM20CQ8IXL6 584 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 TOMM5Q8N4H5 51 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 MEIOBQ8N635 442 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 DNAJC5GQ8N7S2 189 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 RASGEF1AQ8N9B8 481 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 OR4F15Q8NGB8 312 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 SETD6Q8TBK2 473 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 OR5P2Q8WZ92 322 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 AKAP1Q92667 903 aaKnown RBP eCLIP14.13□□□□□ -0.15
USP38-202ENST00000510377 NUS1Q96E22 293 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 MSANTD3Q96H12 275 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 CASD1Q96PB1 797 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 EGLN3Q9H6Z9 239 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 ZNF334Q9HCZ1 680 aaPredicted RBP14.13□□□□□ -0.15
USP38-202ENST00000510377 PAK6Q9NQU5 681 aaPredicted RBP14.13□□□□□ -0.15
USP38-202ENST00000510377 LOC105369274A0A096LPK9 316 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 F11P03951 625 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 CSF2RAP15509 400 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 HLA-FP30511 346 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 ACVR1BP36896 505 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 CCR8P51685 355 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 ALG1LQ6GMV1 187 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 OR4N4Q8N0Y3 316 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 KREMEN2Q8NCW0 462 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 SLC38A5Q8WUX1 472 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 RGMAQ96B86 450 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 GAL3ST1Q99999 423 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 MIA3Q5JRA6 1907 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 ZNF638Q14966 1978 aaKnown RBP14.13□□□□□ -0.15
USP38-202ENST00000510377 RLN1P04808 185 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 CHRNB1P11230 501 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 SLC9A5Q14940 896 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 CDKL4Q5MAI5 379 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 OR8D1Q8WZ84 308 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 C7orf34Q96L11 122 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 PITX2Q99697 317 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 DPCDQ9BVM2 203 aaPredicted RBP14.13□□□□□ -0.15
USP38-202ENST00000510377 CXorf36Q9H7Y0 433 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 MRPS23Q9Y3D9 190 aaKnown RBP14.13□□□□□ -0.15
USP38-202ENST00000510377 PCDHGB2Q9Y5G2 931 aa14.13□□□□□ -0.15
USP38-202ENST00000510377 REM1O75628 298 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 ZNF8P17098 575 aaPredicted RBP14.12□□□□□ -0.15
USP38-202ENST00000510377 IL1RNP18510 177 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 PRR5P85299 388 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 LRRC32Q14392 662 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 LINGO2Q7L985 606 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 CHMP1BQ7LBR1 199 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 ZNF557Q8N988 423 aaPredicted RBP14.12□□□□□ -0.15
USP38-202ENST00000510377 IL17RDQ8NFM7 739 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 SLC7A6Q92536 515 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 MBD1Q9UIS9 605 aaPredicted RBP14.12□□□□□ -0.15
USP38-202ENST00000510377 LATO43561 262 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 CRYZL1O95825 349 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 SCG5P05408 212 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 ADH1AP07327 375 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 ARAFP10398 606 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 GSTM3P21266 225 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 SGCGQ13326 291 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 FGFBP1Q14512 234 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 ANKRD54Q6NXT1 300 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.12□□□□□ -0.15
USP38-202ENST00000510377 PIAS4Q8N2W9 510 aaPredicted RBP14.12□□□□□ -0.15
USP38-202ENST00000510377 ANKK1Q8NFD2 765 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 OR5AR1Q8NGP9 310 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 GABARAPL3Q9BY60 117 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 RETREG1Q9H6L5 497 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 ALG5Q9Y673 324 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 YY2O15391 372 aa14.12□□□□□ -0.15
USP38-202ENST00000510377 DRD5P21918 477 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms