RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SNX29P2Q8IUI4 249 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 SETD6Q8TBK2 473 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 C16orf78Q8WTQ4 265 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 RASSF5Q8WWW0 418 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 SLC35B4Q969S0 331 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 CIDECQ96AQ7 238 aaPredicted RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 OR2M4Q96R27 311 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 F2RL3Q96RI0 385 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 MGLLQ99685 303 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 CTRCQ99895 268 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 NIPSNAP1Q9BPW8 284 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 AIF1LQ9BQI0 150 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 ZNF717Q9BY31 904 aaPredicted RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 NUAK2Q9H093 628 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 GPATCH2Q9NW75 528 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 TMCC3Q9ULS5 477 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 ZNF451Q9Y4E5 1061 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 PCDHGB6Q9Y5F9 930 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 DMDP11532 3685 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 GOLGA4Q13439 2230 aaKnown RBP10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 HEATR5BQ9P2D3 2071 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 LOC100506127A0A0U1RQW1 187 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 A0A1W2PRB8 838 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 ZW10O43264 779 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 OR1F1O43749 312 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 DYRK3O43781 588 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 LCMT2O60294 686 aaKnown RBP10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 TBX19O60806 448 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 STATHP02808 62 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 IL3P08700 152 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 HNRNPA2B1P22626 353 aaKnown RBP10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 PKLRP30613 574 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 GSSP48637 474 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 TPTEP56180 551 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 REEP5Q00765 189 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 NFATC4Q14934 902 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 NCF4Q15080 339 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 KCNJ8Q15842 424 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 PRSS53Q2L4Q9 553 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 MPEG1Q2M385 716 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 COX20Q5RI15 118 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 KHDRBS2Q5VWX1 349 aaKnown RBP10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 FRMPD2BQ6IN97 320 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 REEP3Q6NUK4 255 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 Q6ZPB1 254 aaPredicted RBP10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 SLC9B2Q86UD5 537 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 TAGAPQ8N103 731 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 B3GNT7Q8NFL0 401 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 CEP19Q96LK0 163 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 TEFMQ96QE5 360 aaKnown RBP10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 NLNQ9BYT8 704 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 PCBD2Q9H0N5 130 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 TMEM168Q9H0V1 697 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 RHBGQ9H310 441 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 PELI2Q9HAT8 420 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 TMEM184CQ9NVA4 438 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 RLIMQ9NVW2 624 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 C2orf42Q9NWW7 574 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 KLHL3Q9UH77 587 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 KCND3Q9UK17 655 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 MGAT4BQ9UQ53 548 aa10.42□□□□□ -0.74
SH3RF1-203ENST00000508685 TRBC2A0A5B9 178 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 PPM1DO15297 605 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 PTHP01270 115 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 S100A1P23297 94 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 CSTF2P33240 577 aaKnown RBP eCLIP10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 SLC15A1P46059 708 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 GSTM5P46439 218 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 CASP9P55211 416 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 KIAA1024LP59773 190 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 DSTNP60981 165 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 CSNK1G2P78368 415 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 PRDX1Q06830 199 aaKnown RBP10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 ILKQ13418 452 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 ATAD3BQ5T9A4 648 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 SLX4IPQ5VYV7 408 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 CCDC190Q86UF4 302 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 RNF130Q86XS8 419 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 RAB42Q8N4Z0 105 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 FBXL6Q8N531 539 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 FRMD1Q8N878 549 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 OR52J3Q8NH60 311 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 ASB12Q8WXK4 309 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 TMCO6Q96DC7 493 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 CHCHD6Q9BRQ6 235 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 COL25A1Q9BXS0 654 aaPredicted RBP10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 MS4A8Q9BY19 250 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 OR51E2Q9H255 320 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 AMBNQ9NP70 447 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 LHX9Q9NQ69 397 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 SPHK1Q9NYA1 384 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 FTSJ1Q9UET6 329 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 NDOR1Q9UHB4 597 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 GRIP1Q9Y3R0 1128 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 KNL1Q8NG31 2342 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 SNRNP200O75643 2136 aaKnown RBP10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 VPS13AQ96RL7 3174 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 DSPPQ9NZW4 1301 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 TRBV23OR9-2A0A075B6M9 112 aa10.41□□□□□ -0.74
SH3RF1-203ENST00000508685 A0A0G2JN53 185 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms