RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 STMN3Q9NZ72 180 aa7.53□□□□□ -1.2
SCN1A-207ENST00000507401 TXNDC16Q9P2K2 825 aa7.53□□□□□ -1.2
SCN1A-207ENST00000507401 COPG2Q9UBF2 871 aa7.53□□□□□ -1.2
SCN1A-207ENST00000507401 DCDC2Q9UHG0 476 aa7.53□□□□□ -1.2
SCN1A-207ENST00000507401 IKZF3Q9UKT9 509 aa7.53□□□□□ -1.2
SCN1A-207ENST00000507401 MAST4O15021 2626 aa7.53□□□□□ -1.2
SCN1A-207ENST00000507401 SCN2AQ99250 2005 aa7.52□□□□□ -1.2
SCN1A-207ENST00000507401 SCN3AQ9NY46 2000 aa7.52□□□□□ -1.2
SCN1A-207ENST00000507401 POLEQ07864 2286 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 TCRBV9S1A1TA0A576 114 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ANKUB1A6NFN9 424 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 FAM159BA6NKW6 160 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 H3BSA7 217 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 NDUFS4O43181 175 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 SEMA7AO75326 666 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 JRKO75564 520 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 C1QAP02745 245 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 INHBBP09529 407 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 C1GALT1C1LP0DN25 315 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 COX4I1P13073 169 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ATP6V1B1P15313 513 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 STMN1P16949 149 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 IL1RNP18510 177 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ME2P23368 584 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 SPRP35270 261 aaPredicted RBP7.52□□□□□ -1.21
SCN1A-207ENST00000507401 GP5P40197 560 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ADH7P40394 386 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 GSSP48637 474 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 EIF2B2P49770 351 aaKnown RBP7.52□□□□□ -1.21
SCN1A-207ENST00000507401 EFNA3P52797 238 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ALDH18A1P54886 795 aaKnown RBP7.52□□□□□ -1.21
SCN1A-207ENST00000507401 GPX6P59796 221 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ARG2P78540 354 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 RHAGQ02094 409 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 EEF1A2Q05639 463 aaKnown RBP7.52□□□□□ -1.21
SCN1A-207ENST00000507401 TSNQ15631 228 aaKnown RBP7.52□□□□□ -1.21
SCN1A-207ENST00000507401 NSDHLQ15738 373 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 CHI3L2Q15782 390 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 EXT1Q16394 746 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 TRIM16LQ309B1 348 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 C6orf10Q5SRN2 563 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 GRTP1Q5TC63 336 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ABHD17BQ5VST6 288 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 LPCAT4Q643R3 524 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 FAAH2Q6GMR7 532 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 C8orf86Q6ZUL3 223 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 FKBP9P1Q75LS8 142 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ABHD13Q7L211 337 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 PRSS41Q7RTY9 318 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ANKRD37Q7Z713 158 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 DEFB107AQ8IZN7 70 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ZNF740Q8NDX6 193 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 TTLQ8NG68 377 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 OR1N1Q8NGS0 311 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 DNAJB8Q8NHS0 232 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 GRHL3Q8TE85 626 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 UTP15Q8TED0 518 aaKnown RBP7.52□□□□□ -1.21
SCN1A-207ENST00000507401 RAB2BQ8WUD1 216 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 TBC1D20Q96BZ9 403 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 RHBDF1Q96CC6 855 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 MOCOSQ96EN8 888 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ZNF354BQ96LW1 612 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 CNBD2Q96M20 576 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ZNF347Q96SE7 839 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 GPR22Q99680 433 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 RBBP8Q99708 897 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 EGFL8Q99944 293 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 MROQ9BYG7 248 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 TRIM15Q9C019 465 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 PAIP1Q9H074 479 aaKnown RBP7.52□□□□□ -1.21
SCN1A-207ENST00000507401 EHD1Q9H4M9 534 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 RMND5AQ9H871 391 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 MMP25Q9NPA2 562 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 LANCL2Q9NS86 450 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 GPRC5BQ9NZH0 403 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 HCN3Q9P1Z3 774 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ARMCX1Q9P291 453 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 PTGFRNQ9P2B2 879 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 SLC17A7Q9P2U7 560 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 VTI1BQ9UEU0 232 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 ERVK-11Q9UQG0 969 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 NTNG1Q9Y2I2 539 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 PCDHGB6Q9Y5F9 930 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 CSAG2Q9Y5P2 127 aa7.52□□□□□ -1.21
SCN1A-207ENST00000507401 HIVEP3Q5T1R4 2406 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 NAV2Q8IVL1 2488 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 ISPDA4D126 451 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 WDR91A4D1P6 747 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 BLACEA4D250 179 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 SAC3D1A6NKF1 404 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 CXorf49A8MYA2 514 aaPredicted RBP7.51□□□□□ -1.21
SCN1A-207ENST00000507401 FOXO6A8MYZ6 492 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 BOLA2-SMG1P6H3BVE0 249 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 M0R082 166 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 CHST10O43529 356 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 RDH16O75452 317 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 WDPCPO95876 746 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 STATHP02808 62 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 FHP07954 510 aa7.51□□□□□ -1.21
SCN1A-207ENST00000507401 ITGAMP11215 1152 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms