RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ZNF639Q9UID6 485 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 ARHGAP10A1A4S6 786 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 SERTM1A2A2V5 107 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 ANKRD33BA6NCL7 494 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 OR14I1A6ND48 311 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 LRRC3CA6NJW4 275 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 FOXO6A8MYZ6 492 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 GLRA3O75311 464 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 PDE9AO76083 593 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 CLDN14O95500 239 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 ESRRBO95718 433 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 PROCP04070 461 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 ENO1P06733 434 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 TPOP07202 933 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 PRF1P14222 555 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 SERPINB3P29508 390 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 MAGEA5P43359 124 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 HTR6P50406 440 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 PKNOX1P55347 436 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 RAE1P78406 368 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 DUSP2Q05923 314 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 MAP4K2Q12851 820 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 DUSP8Q13202 625 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 PRICKLE4Q2TBC4 344 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 PAOXQ6QHF9 649 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 ZYG11AQ6WRX3 759 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 TRILQ7L0X0 811 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 EID3Q8N140 333 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 MARVELD2Q8N4S9 558 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 GBP7Q8N8V2 638 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 OR7G1Q8NGA0 311 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 OR10G3Q8NGC4 313 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 METTL6Q8TCB7 284 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 CTHRC1Q96CG8 243 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 ZNF681Q96N22 645 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 GAL3ST4Q96RP7 486 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 OR10A5Q9H207 317 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 TP63Q9H3D4 680 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 ZNF703Q9H7S9 590 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 PPCSQ9HAB8 311 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 SIRT5Q9NXA8 310 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 MAT2BQ9NZL9 334 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 CNIH4Q9P003 139 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 MCM8Q9UJA3 840 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 CNOT11Q9UKZ1 510 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 STK38LQ9Y2H1 464 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 LIPGQ9Y5X9 500 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 APCP25054 2843 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 EXPH5Q8NEV8 1989 aa8.35□□□□□ -1.07
PDLIM5-209ENST00000506632 PHF3Q92576 2039 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 LRBAP50851 2863 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 C2orf92A0A1B0GVN3 265 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 GOLGA6L10A6NI86 522 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 C19orf84I3L1E1 186 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 AQP7O14520 342 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 UBFD1O14562 309 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 SUSD5O60279 629 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 PLIN3O60664 434 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 TRIM3O75382 744 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 ULK1O75385 1050 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 CBX7O95931 251 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 CELA3AP09093 270 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 RFPL3SP0C7P2 107 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 CSNK2A2P19784 350 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 GPX3P22352 226 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 HMOX2P30519 316 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 NAA20P61599 178 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 RPS6KA2Q15349 733 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 GXYLT1Q4G148 440 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 PRAMEF20Q5VT98 475 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 DESI1Q6ICB0 168 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 GALNT18Q6P9A2 607 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 FAM111BQ6SJ93 734 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 TMEM64Q6YI46 380 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 FRMD7Q6ZUT3 714 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 RETREG3Q86VR2 466 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 TAGAPQ8N103 731 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 DEPDC4Q8N2C3 294 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 LRRC25Q8N386 305 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 VWA5B2Q8N398 1253 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 RPRMLQ8N4K4 120 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 SPPL2AQ8TCT8 520 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.34□□□□□ -1.075e-8■■■■■ 65.3
PDLIM5-209ENST00000506632 CCDC126Q96EE4 140 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 CNRIP1Q96F85 164 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 APIPQ96GX9 242 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 SMC6Q96SB8 1091 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 SECISBP2Q96T21 854 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 TREX2Q9BQ50 279 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 FAIM2Q9BWQ8 316 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 ZFP64Q9NPA5 681 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 QPCTLQ9NXS2 382 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 HEY2Q9UBP5 337 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 DTX4Q9Y2E6 619 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 TIMM22Q9Y584 194 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 NPFFR2Q9Y5X5 522 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 NCKAP5O14513 1909 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 NINQ8N4C6 2090 aa8.34□□□□□ -1.07
PDLIM5-209ENST00000506632 NPIPA2E9PIF3 369 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms