RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 GOLGA6L10A6NI86 522 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 TMEM114B3SHH9 223 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 NME6O75414 186 aaPredicted RBP16.49■□□□□ 0.23
SMN1-204ENST00000506163 SKAP2O75563 359 aaPredicted RBP16.49■□□□□ 0.23
SMN1-204ENST00000506163 ATP6AP2O75787 350 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 CHEK2O96017 543 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 NEFHP12036 1026 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 PCSK2P16519 638 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 GSTM5P46439 218 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 SLC1A6P48664 564 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 RPL38P63173 70 aaKnown RBP16.49■□□□□ 0.23
SMN1-204ENST00000506163 MRPS35P82673 323 aaKnown RBP16.49■□□□□ 0.23
SMN1-204ENST00000506163 EIF2S3LQ2VIR3 472 aaKnown RBP16.49■□□□□ 0.23
SMN1-204ENST00000506163 GALNTL6Q49A17 601 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 FAM180AQ6UWF9 173 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 SULF2Q8IWU5 870 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 LRRC25Q8N386 305 aaPredicted RBP16.49■□□□□ 0.23
SMN1-204ENST00000506163 VWA5B2Q8N398 1253 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 BCORP1Q8N888 145 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 C16orf52Q8NHV5 167 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 MGARPQ8TDB4 240 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 ASB15Q8WXK1 588 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 NR4A3Q92570 626 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 C5orf34Q96MH7 638 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 PAIP2Q9BPZ3 127 aaKnown RBP16.49■□□□□ 0.23
SMN1-204ENST00000506163 BRINP2Q9C0B6 783 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 AGPAT4Q9NRZ5 378 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 TAS2R7Q9NYW3 318 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 EHD3Q9NZN3 535 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 ZNF780BQ9Y6R6 833 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 USP9XQ93008 2570 aaPredicted RBP16.49■□□□□ 0.23
SMN1-204ENST00000506163 COL12A1Q99715 3063 aa16.49■□□□□ 0.23
SMN1-204ENST00000506163 A0A0G2JMM0 328 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 A0A1W2PPB8 328 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 A0A1W2PRS3 328 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 CLEC18AA5D8T8 446 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 A8MVJ9 347 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 KIR3DP1A8MWS1 328 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 PEX11AO75192 247 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 HSPA4LO95757 839 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 SLC18A1P54219 525 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 BST1Q10588 318 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 ZNF791Q3KP31 576 aaPredicted RBP16.48■□□□□ 0.23
SMN1-204ENST00000506163 ZNF628Q5EBL2 1059 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 CLEC18BQ6UXF7 455 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 TMEM64Q6YI46 380 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 CPSF7Q8N684 471 aaKnown RBP16.48■□□□□ 0.23
SMN1-204ENST00000506163 HORMAD2Q8N7B1 307 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 CLEC18CQ8NCF0 446 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 OR9A2Q8NGT5 310 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 CLHC1Q8NHS4 586 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 NUDT8Q8WV74 236 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 KAT2AQ92830 837 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 GFM2Q969S9 779 aaKnown RBP16.48■□□□□ 0.23
SMN1-204ENST00000506163 FRMD6Q96NE9 622 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 GAL3ST4Q96RP7 486 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 STMN4Q9H169 189 aaPredicted RBP16.48■□□□□ 0.23
SMN1-204ENST00000506163 OLAHQ9NV23 265 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 HPF1Q9NWY4 346 aa16.48■□□□□ 0.23
SMN1-204ENST00000506163 WBP11Q9Y2W2 641 aaKnown RBP16.48■□□□□ 0.23
SMN1-204ENST00000506163 PINLYPA6NC86 204 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 OR6C76A6NM76 312 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 MYO1GB0I1T2 1018 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 BCKDHAP12694 445 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 GPR85P60893 370 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 STX3Q13277 289 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 ZNF385BQ569K4 471 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 TTMPQ5BVD1 217 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 C6orf136Q5SQH8 315 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 HHATQ5VTY9 493 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 ANKRD26P1Q6NSI1 321 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 SLC29A4Q7RTT9 530 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 TMEM178AQ8NBL3 297 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 ST6GALNAC3Q8NDV1 305 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 OR7G1Q8NGA0 311 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 ZNF675Q8TD23 568 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 TSSK3Q96PN8 268 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 CCT7Q99832 543 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 SH2D2AQ9NP31 389 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 PNPOQ9NVS9 261 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.47■□□□□ 0.23
SMN1-204ENST00000506163 HAO1Q9UJM8 370 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 ERVK-11Q9UQG0 969 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 RAP2CQ9Y3L5 183 aa16.47■□□□□ 0.23
SMN1-204ENST00000506163 C2orf92A0A1B0GVN3 265 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 ANKUB1A6NFN9 424 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 AKAP10O43572 662 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 LRATO95237 230 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 GPX3P22352 226 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 GRK2P25098 689 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 RFC3P40938 356 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 EMDP50402 254 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 NR0B1P51843 470 aaKnown RBP16.46■□□□□ 0.23
SMN1-204ENST00000506163 FHL5Q5TD97 284 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 AGBL2Q5U5Z8 902 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 IKBIPQ70UQ0 350 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 SIAH3Q8IW03 269 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 GPALPP1Q8IXQ4 340 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 PSD4Q8NDX1 1056 aa16.46■□□□□ 0.23
SMN1-204ENST00000506163 OR52R1Q8NGF1 315 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms