RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CPPED1Q9BRF8 314 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 NMUR2Q9GZQ4 415 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 RABEP2Q9H5N1 569 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 ATAD3AQ9NVI7 634 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZMIZ1Q9ULJ6 1067 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 AK5Q9Y6K8 562 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 ETV2O00321 342 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 PDPK1O15530 556 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 FBXO45P0C2W1 286 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 KITP10721 976 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 CPOXP36551 454 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 HBA1P69905 142 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 GAB1Q13480 694 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZNF750Q32MQ0 723 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 RPUSD3Q6P087 351 aaKnown RBP7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 AGR3Q8TD06 166 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 DYDC1Q8WWB3 177 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 ART5Q96L15 291 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 DUSP26Q9BV47 211 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 PROK2Q9HC23 129 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 RIF1Q5UIP0 2472 aaKnown RBP7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 ACOX3O15254 700 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 PTGDSP41222 190 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 XKP51811 444 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 DCAF7P61962 342 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 PSG6Q00889 435 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 FAM69BQ5VUD6 431 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 PAOXQ6QHF9 649 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 VASH2Q86V25 355 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 CCT6BQ92526 530 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 SECISBP2Q96T21 854 aaKnown RBP7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 SPATA9Q9BWV2 254 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZMYND15Q9H091 742 aa7.69□□□□□ -1.18
CDC42SE2-208ENST00000505065 ANKRD33BA6NCL7 494 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 POLR3GO15318 223 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 TNFRSF21O75509 655 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 GPX2P18283 190 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 CDKN2CP42773 168 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 CDK9P50750 372 aaKnown RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 RUNDC3AQ59EK9 446 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 SPANXN4Q5MJ08 99 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 PPCDCQ96CD2 204 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZBED6CLQ96FA7 236 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 RSPO3Q9BXY4 272 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 WWTR1Q9GZV5 400 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 C1orf21Q9H246 121 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZNF552Q9H707 407 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 GOLGA8QA0A0J9YX86 632 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 PRAMEF27A3QJZ7 478 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 GOLGA8OA6NCC3 632 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 GOLGA8NF8WBI6 632 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 NKX2-8O15522 239 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 ITGAMP11215 1152 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 UQCRC2P22695 453 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 PIK3R1P27986 724 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 CPTPQ5TA50 214 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 CCDC80Q76M96 950 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 FAM71CQ8NEG0 241 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 RP9Q8TA86 221 aaKnown RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 KIAA1143Q96AT1 154 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 FAM120BQ96EK7 910 aaKnown RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 NSRP1Q9H0G5 558 aaKnown RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 POLE3Q9NRF9 147 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 TAS2R9Q9NYW1 312 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 DTX4Q9Y2E6 619 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 ARHGAP10A1A4S6 786 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR2W5A6NFC9 320 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZNF354AO60765 605 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 MPIP34949 423 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 PPICP45877 212 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 ADRM1Q16186 407 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 NTRK2Q16620 822 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 CCDC157Q569K6 752 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 PAGE3Q5JUK9 113 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 CDC73Q6P1J9 531 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 SIMC1Q8NDZ2 872 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR52E4Q8NGH9 312 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 FER1L6-AS2Q96M78 137 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 TSSK3Q96PN8 268 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 LHPPQ9H008 270 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 DUSP22Q9NRW4 184 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 POLHQ9Y253 713 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 TMEM229AB2RXF0 380 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 PSMD12O00232 456 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 CCDC22O60826 627 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZIC2O95409 532 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 SERPIND1P05546 499 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 ITPKBP27987 946 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 ADH7P40394 386 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 RNF4P78317 190 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 LTB4RQ15722 352 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 MFSD12Q6NUT3 480 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 MYLK4Q86YV6 388 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 KBTBD2Q8IY47 623 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 VWA5B2Q8N398 1253 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR9I1Q8NGQ6 314 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR9A2Q8NGT5 310 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 DAZLQ92904 295 aaKnown RBP7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 ROPN1LQ96C74 230 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms