RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ZNF781Q8N8C0 355 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 SAMD12Q8N8I0 201 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 CHDHQ8NE62 594 aaPredicted RBP3.31□□□□□ -1.88
SMC4-225ENST00000497203 FCGR1BQ92637 280 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 NABP1Q96AH0 204 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 MRPL38Q96DV4 380 aaKnown RBP3.31□□□□□ -1.88
SMC4-225ENST00000497203 DEFB118Q96PH6 123 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 CHCHD5Q9BSY4 110 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 NDUFAF3Q9BU61 184 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 LRRC61Q9BV99 259 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 EGLN1Q9GZT9 426 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 TUBB1Q9H4B7 451 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 NT5DC2Q9H857 520 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 Q9HAA7 133 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 ELL3Q9HB65 397 aaPredicted RBP3.31□□□□□ -1.88
SMC4-225ENST00000497203 POLE3Q9NRF9 147 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 GTSE1Q9NYZ3 720 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 THAP10Q9P2Z0 257 aaPredicted RBP3.31□□□□□ -1.88
SMC4-225ENST00000497203 EPS15L1Q9UBC2 864 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 MIOXQ9UGB7 285 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 IL20RAQ9UHF4 553 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 SLC9A8Q9Y2E8 581 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 ZMYM6O95789 1325 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 FAM205AQ6ZU69 1335 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 IGHV3OR16-10A0A075B7F0 116 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 IGKV3D-15A0A087WSY6 115 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 NPIPA5A0A0B4J1W7 369 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 A0A0J9YWU9 116 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 A8MXK9 166 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 NPIPA5E9PKD4 350 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 FRAT2O75474 233 aaPredicted RBP3.3□□□□□ -1.88
SMC4-225ENST00000497203 TBX6O95947 436 aaPredicted RBP3.3□□□□□ -1.88
SMC4-225ENST00000497203 FOSL2P15408 326 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 DESP17661 470 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 ZNF10P21506 573 aaPredicted RBP3.3□□□□□ -1.88
SMC4-225ENST00000497203 RPA1P27694 616 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 PPP2R1BP30154 601 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 NDUFV3P56181 108 aaKnown RBP3.3□□□□□ -1.88
SMC4-225ENST00000497203 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 SPP2Q13103 211 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 ENPP2Q13822 863 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 ZNF528Q3MIS6 628 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 DOK6Q6PKX4 331 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 GPBP1Q86WP2 473 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 PYROXD2Q8N2H3 581 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 ZNF485Q8NCK3 441 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 OR4F5Q8NH21 305 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 TAF15Q92804 592 aaKnown RBP eCLIP3.3□□□□□ -1.88
SMC4-225ENST00000497203 NCLNQ969V3 563 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 C16orf45Q96MC5 204 aaPredicted RBP3.3□□□□□ -1.88
SMC4-225ENST00000497203 TSPAN18Q96SJ8 248 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 CPXM1Q96SM3 734 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 IWS1Q96ST2 819 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 PSMB7Q99436 277 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 WRAP53Q9BUR4 548 aaKnown RBP3.3□□□□□ -1.88
SMC4-225ENST00000497203 RAB11FIP5Q9BXF6 653 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 NLNQ9BYT8 704 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 SEC14L4Q9UDX3 406 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.3□□□□□ -1.88
SMC4-225ENST00000497203 MOB4Q9Y3A3 225 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 PRSS21Q9Y6M0 314 aa3.3□□□□□ -1.88
SMC4-225ENST00000497203 TDRD15B5MCY1 1934 aaKnown RBP3.29□□□□□ -1.88
SMC4-225ENST00000497203 A0A0A6YYD4 124 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 K7EQG2 157 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 LGALS8O00214 317 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 CYB561D2O14569 222 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 SORBS2O94875 1100 aaKnown RBP3.29□□□□□ -1.88
SMC4-225ENST00000497203 OR9G9P0C7N8 305 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 LMO2P25791 158 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 SPRP35270 261 aaPredicted RBP3.29□□□□□ -1.88
SMC4-225ENST00000497203 SLC1A4P43007 532 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 HERVK_113P63132 956 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 ERVK-8P63133 956 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 SCGB2A2Q13296 93 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 ZSWIM7Q19AV6 140 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 PARP6Q2NL67 630 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 ACSF3Q4G176 576 aaPredicted RBP3.29□□□□□ -1.88
SMC4-225ENST00000497203 LIPKQ5VXJ0 399 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 ARSKQ6UWY0 536 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 MOB2Q70IA6 237 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 TMUB2Q71RG4 321 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 LUZP1Q86V48 1076 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 AMZ2Q86W34 360 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 CERS5Q8N5B7 392 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 TEX9Q8N6V9 391 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 MINDY2Q8NBR6 621 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 RELL2Q8NC24 303 aaPredicted RBP3.29□□□□□ -1.88
SMC4-225ENST00000497203 MIPOL1Q8TD10 442 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 CHPT1Q8WUD6 406 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 PINX1Q96BK5 328 aaKnown RBP3.29□□□□□ -1.88
SMC4-225ENST00000497203 WBP1Q96G27 269 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 C18orf12Q96KH6 178 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 ZNF599Q96NL3 588 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 HSD17B14Q9BPX1 270 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 RBM4BQ9BQ04 359 aaKnown RBP3.29□□□□□ -1.88
SMC4-225ENST00000497203 CABLES2Q9BTV7 478 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 RBM24Q9BX46 236 aaKnown RBP3.29□□□□□ -1.88
SMC4-225ENST00000497203 ERVK-6Q9BXR3 956 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 TRIM15Q9C019 465 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 RWDD1Q9H446 243 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms