RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 BICRALQ6AI39 1079 aa11.9□□□□□ -0.5
FN1-226ENST00000496542 COMMD6Q7Z4G1 85 aa11.9□□□□□ -0.5
FN1-226ENST00000496542 LRRC25Q8N386 305 aaPredicted RBP11.9□□□□□ -0.5
FN1-226ENST00000496542 OR4F6Q8NGB9 312 aa11.9□□□□□ -0.5
FN1-226ENST00000496542 DCAKDQ8WVC6 231 aa11.9□□□□□ -0.5
FN1-226ENST00000496542 ZNF597Q96LX8 424 aa11.9□□□□□ -0.5
FN1-226ENST00000496542 MRPL57Q9BQC6 102 aaKnown RBP11.9□□□□□ -0.5
FN1-226ENST00000496542 TSPYL1Q9H0U9 437 aa11.9□□□□□ -0.5
FN1-226ENST00000496542 MRPL46Q9H2W6 279 aaKnown RBP11.9□□□□□ -0.5
FN1-226ENST00000496542 FARSBQ9NSD9 589 aaKnown RBP11.9□□□□□ -0.5
FN1-226ENST00000496542 AHSPQ9NZD4 102 aa11.9□□□□□ -0.5
FN1-226ENST00000496542 Q9UFV3 132 aa11.9□□□□□ -0.5
FN1-226ENST00000496542 ADAM29Q9UKF5 820 aa11.9□□□□□ -0.5
FN1-226ENST00000496542 SLC12A4Q9UP95 1085 aa11.9□□□□□ -0.5
FN1-226ENST00000496542 A0A1B0GTL3 188 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 CAPN14A8MX76 684 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 PPP6CO00743 305 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 OTCP00480 354 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 RPS17P08708 135 aaKnown RBP11.89□□□□□ -0.51
FN1-226ENST00000496542 COL6A2P12110 1019 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 CPMP14384 443 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 ZFP36L2P47974 494 aaKnown RBP11.89□□□□□ -0.51
FN1-226ENST00000496542 CDH13P55290 713 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 FUT7Q11130 342 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 GGTA1PQ4G0N0 100 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 C10orf62Q5T681 223 aaPredicted RBP11.89□□□□□ -0.51
FN1-226ENST00000496542 TMEM198Q66K66 360 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 LETMD1Q6P1Q0 360 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 DMRTC2Q8IXT2 367 aaPredicted RBP11.89□□□□□ -0.51
FN1-226ENST00000496542 PRR22Q8IZ63 422 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 MMP21Q8N119 569 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 METTL4Q8N3J2 472 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 MNS1Q8NEH6 495 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 NEIL3Q8TAT5 605 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 ZNF483Q8TF39 744 aaPredicted RBP11.89□□□□□ -0.51
FN1-226ENST00000496542 TP53INP1Q96A56 240 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 RILPQ96NA2 401 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 OR10A5Q9H207 317 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 QPCTLQ9NXS2 382 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 NPFFR2Q9Y5X5 522 aa11.89□□□□□ -0.51
FN1-226ENST00000496542 MAP1AP78559 2803 aaPredicted RBP11.88□□□□□ -0.51
FN1-226ENST00000496542 A0A087WUV0 522 aaPredicted RBP11.88□□□□□ -0.51
FN1-226ENST00000496542 C15orf38-AP3S2A0A0A6YYH1 394 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 EXOC1LA0A1B0GW35 172 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 A8MT66 165 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 TRIM3O75382 744 aaPredicted RBP11.88□□□□□ -0.51
FN1-226ENST00000496542 ERAL1O75616 437 aaKnown RBP11.88□□□□□ -0.51
FN1-226ENST00000496542 PDYNP01213 254 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 HOXD4P09016 255 aaPredicted RBP11.88□□□□□ -0.51
FN1-226ENST00000496542 GABRA1P14867 456 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 PORP16435 677 aaPredicted RBP11.88□□□□□ -0.51
FN1-226ENST00000496542 KRT15P19012 456 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 CNTFP26441 200 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 ECHS1P30084 290 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 DEKP35659 375 aaKnown RBP11.88□□□□□ -0.51
FN1-226ENST00000496542 MASP1P48740 699 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 TMED10P49755 219 aaKnown RBP11.88□□□□□ -0.51
FN1-226ENST00000496542 NRG3P56975 720 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 MYBPHQ13203 477 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 NNATQ16517 81 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 TBCELQ5QJ74 424 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 TEX35Q5T0J7 233 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 WDR53Q7Z5U6 358 aaPredicted RBP11.88□□□□□ -0.51
FN1-226ENST00000496542 TMEM200AQ86VY9 491 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 ULK2Q8IYT8 1036 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 VWA5B2Q8N398 1253 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 ZNF615Q8N8J6 731 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 OR7G1Q8NGA0 311 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 SPPL2AQ8TCT8 520 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 SELENOMQ8WWX9 145 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 ADIPOR1Q96A54 375 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 HBEGFQ99075 208 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 ZNF559Q9BR84 538 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 BRINP2Q9C0B6 783 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 ACKR4Q9NPB9 350 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 RYDENQ9NUL5 291 aaKnown RBP11.88□□□□□ -0.51
FN1-226ENST00000496542 ZNF180Q9UJW8 692 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 SNX6Q9UNH7 406 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 DTX4Q9Y2E6 619 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 PCDHA9Q9Y5H5 950 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 ITPR3Q14573 2671 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 ABCA4P78363 2273 aa11.88□□□□□ -0.51
FN1-226ENST00000496542 MPDZO75970 2070 aa11.87□□□□□ -0.51
FN1-226ENST00000496542 GOLGA6L10A6NI86 522 aa11.87□□□□□ -0.51
FN1-226ENST00000496542 FAM47E-STBD1D6RA91 191 aa11.87□□□□□ -0.51
FN1-226ENST00000496542 GUCY1B2O75343 617 aa11.87□□□□□ -0.51
FN1-226ENST00000496542 TRAPPC6AO75865 159 aa11.87□□□□□ -0.51
FN1-226ENST00000496542 SNRPAP09012 282 aaKnown RBP11.87□□□□□ -0.51
FN1-226ENST00000496542 SBK3P0C264 359 aa11.87□□□□□ -0.51
FN1-226ENST00000496542 CTAGE8P0CG41 777 aa11.87□□□□□ -0.51
FN1-226ENST00000496542 GPX3P22352 226 aa11.87□□□□□ -0.51
FN1-226ENST00000496542 FEN1P39748 380 aaKnown RBP11.87□□□□□ -0.51
FN1-226ENST00000496542 ALDH9A1P49189 494 aa11.87□□□□□ -0.51
FN1-226ENST00000496542 RPP38P78345 283 aaKnown RBP11.87□□□□□ -0.51
FN1-226ENST00000496542 GALNT1Q10472 559 aaPredicted RBP11.87□□□□□ -0.51
FN1-226ENST00000496542 DUSP8Q13202 625 aa11.87□□□□□ -0.51
FN1-226ENST00000496542 EXOSC7Q15024 291 aaKnown RBP11.87□□□□□ -0.51
FN1-226ENST00000496542 SLC25A35Q3KQZ1 300 aa11.87□□□□□ -0.51
FN1-226ENST00000496542 RIPPLY2Q5TAB7 128 aa11.87□□□□□ -0.51
FN1-226ENST00000496542 SLC48A1Q6P1K1 146 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms