RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 DUSP8Q13202 625 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 NR6A1Q15406 480 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 OR1C1Q15619 314 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 LTB4RQ15722 352 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 SLC9B1Q4ZJI4 515 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 SPINK14Q6IE38 97 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 RPUSD3Q6P087 351 aaKnown RBP15.88■□□□□ 0.13
SNX17-209ENST00000494893 FAM111BQ6SJ93 734 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 DDIASQ8IXT1 998 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 ANKS4BQ8N8V4 417 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 SIMC1Q8NDZ2 872 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 METTL2AQ96IZ6 378 aaKnown RBP15.88■□□□□ 0.13
SNX17-209ENST00000494893 MAELQ96JY0 434 aaKnown RBP15.88■□□□□ 0.13
SNX17-209ENST00000494893 EBF4Q9BQW3 602 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 UTP23Q9BRU9 249 aaKnown RBP15.88■□□□□ 0.13
SNX17-209ENST00000494893 CNPPD1Q9BV87 410 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 MYOTQ9UBF9 498 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 UTS2RQ9UKP6 389 aa15.88■□□□□ 0.13
SNX17-209ENST00000494893 CNTRLQ7Z7A1 2325 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 WWP2O00308 870 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 PRAMEF2O60811 474 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 OR2J2O76002 312 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 NADKO95544 446 aaPredicted RBP15.87■□□□□ 0.13
SNX17-209ENST00000494893 ATP1B1P05026 303 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 SDC1P18827 310 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 HLCSP50747 726 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 RPL38P63173 70 aaKnown RBP15.87■□□□□ 0.13
SNX17-209ENST00000494893 C2orf80Q0P641 193 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 CEBPEQ15744 281 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 PRICKLE4Q2TBC4 344 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 GALNT12Q8IXK2 581 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 ZNF615Q8N8J6 731 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 CDC26Q8NHZ8 85 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 SUN3Q8TAQ9 357 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 EXOSC8Q96B26 276 aaKnown RBP15.87■□□□□ 0.13
SNX17-209ENST00000494893 SCMH1Q96GD3 660 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 RASL10BQ96S79 203 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 CCDC28BQ9BUN5 200 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 WDR55Q9H6Y2 383 aaPredicted RBP15.87■□□□□ 0.13
SNX17-209ENST00000494893 MAT2BQ9NZL9 334 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 ABI3Q9P2A4 366 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 COPS7AQ9UBW8 275 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 ZNF639Q9UID6 485 aa15.87■□□□□ 0.13
SNX17-209ENST00000494893 SHANK1Q9Y566 2161 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 ATP6AP2A0A1C7CYW4 349 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 ATP6AP2O75787 350 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 CSNK2A2P19784 350 aaPredicted RBP15.86■□□□□ 0.13
SNX17-209ENST00000494893 DDCP20711 480 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 NT5EP21589 574 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 GSTM5P46439 218 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 PMP22Q01453 160 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 OC90Q02509 493 aaPredicted RBP15.86■□□□□ 0.13
SNX17-209ENST00000494893 SRSF11Q05519 484 aaKnown RBP15.86■□□□□ 0.13
SNX17-209ENST00000494893 MAP4K2Q12851 820 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 HEPACAMQ14CZ8 416 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 EBPQ15125 230 aaKnown RBP15.86■□□□□ 0.13
SNX17-209ENST00000494893 GALNTL6Q49A17 601 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 ZNF766Q5HY98 468 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 LYPD8Q6UX82 237 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 ACAD11Q709F0 780 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 ZNF441Q8N8Z8 693 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 ADCY4Q8NFM4 1077 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 ACTRT2Q8TDY3 377 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 GRHL3Q8TE85 626 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 CTHRC1Q96CG8 243 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 ART5Q96L15 291 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 PPP1R36Q96LQ0 422 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 RILPQ96NA2 401 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 OR52B2Q96RD2 323 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 TCF7L2Q9NQB0 619 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 EHD3Q9NZN3 535 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 LRFN1Q9P244 771 aa15.86■□□□□ 0.13
SNX17-209ENST00000494893 YARS2Q9Y2Z4 477 aaKnown RBP15.86■□□□□ 0.13
SNX17-209ENST00000494893 COPG1Q9Y678 874 aaKnown RBP15.86■□□□□ 0.13
SNX17-209ENST00000494893 RELNP78509 3460 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 GOLGA8QA0A0J9YX86 632 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 GOLGA8OA6NCC3 632 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 GOLGA8NF8WBI6 632 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 CDK2AP1O14519 115 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 FCHO1O14526 889 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 PEX11AO75192 247 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 VPS4BO75351 444 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 WISP2O76076 250 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 OR6B1O95007 311 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 WISP1O95388 367 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 CBX7O95931 251 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 BCKDHAP12694 445 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 EPHA3P29320 983 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 SOX3P41225 446 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 SSR4P51571 173 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 MPEG1Q2M385 716 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 C6orf136Q5SQH8 315 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 ZNF324BQ6AW86 544 aaPredicted RBP15.85■□□□□ 0.13
SNX17-209ENST00000494893 RNF111Q6ZNA4 994 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 MDGA2Q7Z553 956 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 TICAM1Q8IUC6 712 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 CCDC116Q8IYX3 515 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 LRRC25Q8N386 305 aaPredicted RBP15.85■□□□□ 0.13
SNX17-209ENST00000494893 CEP70Q8NHQ1 597 aa15.85■□□□□ 0.13
SNX17-209ENST00000494893 CLHC1Q8NHS4 586 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms