RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PPCDCQ96CD2 204 aa12.56□□□□□ -0.4
COL1A1-208ENST00000494334 ZNF764Q96H86 408 aaPredicted RBP12.56□□□□□ -0.4
COL1A1-208ENST00000494334 MAGEB18Q96M61 343 aa12.56□□□□□ -0.4
COL1A1-208ENST00000494334 SIGLEC12Q96PQ1 595 aa12.56□□□□□ -0.4
COL1A1-208ENST00000494334 BBS4Q96RK4 519 aa12.56□□□□□ -0.4
COL1A1-208ENST00000494334 UTP23Q9BRU9 249 aaKnown RBP12.56□□□□□ -0.4
COL1A1-208ENST00000494334 GLIPR2Q9H4G4 154 aa12.56□□□□□ -0.4
COL1A1-208ENST00000494334 WDR55Q9H6Y2 383 aaPredicted RBP12.56□□□□□ -0.4
COL1A1-208ENST00000494334 TRIM45Q9H8W5 580 aaPredicted RBP12.56□□□□□ -0.4
COL1A1-208ENST00000494334 SLAMF7Q9NQ25 335 aa12.56□□□□□ -0.4
COL1A1-208ENST00000494334 NOP53Q9NZM5 478 aaKnown RBP12.56□□□□□ -0.4
COL1A1-208ENST00000494334 SH3BP4Q9P0V3 963 aa12.56□□□□□ -0.4
COL1A1-208ENST00000494334 YARS2Q9Y2Z4 477 aaKnown RBP12.56□□□□□ -0.4
COL1A1-208ENST00000494334 TRAV17A0A0B4J275 112 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 GOLGA8QA0A0J9YX86 632 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 GOLGA8OA6NCC3 632 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 GOLGA8NF8WBI6 632 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 ZNF354AO60765 605 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-208ENST00000494334 CBX7O95931 251 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 PCSK2P16519 638 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 EPHA3P29320 983 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 CYB561P49447 251 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 NCBP2P52298 156 aaKnown RBP eCLIP12.55□□□□□ -0.4
COL1A1-208ENST00000494334 OC90Q02509 493 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-208ENST00000494334 DUSP8Q13202 625 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 EXOSC7Q15024 291 aaKnown RBP12.55□□□□□ -0.4
COL1A1-208ENST00000494334 OR1C1Q15619 314 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 SLC9B1Q4ZJI4 515 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 HSP90B2PQ58FF3 399 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 PIGGQ5H8A4 983 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 SLC29A4Q7RTT9 530 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 PRICKLE2Q7Z3G6 844 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 MAVSQ7Z434 540 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 R3HCC1LQ7Z5L2 792 aaKnown RBP12.55□□□□□ -0.4
COL1A1-208ENST00000494334 ZNF227Q86WZ6 799 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 FAM9CQ8IZT9 166 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 TMEM156Q8N614 296 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 KRTCAP2Q8N6L1 136 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 MDS2Q8NDY4 140 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 NUDT8Q8WV74 236 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 KAT2AQ92830 837 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 MTERF3Q96E29 417 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 MAELQ96JY0 434 aaKnown RBP12.55□□□□□ -0.4
COL1A1-208ENST00000494334 RASL10BQ96S79 203 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 EPN3Q9H201 632 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 ANKRA2Q9H9E1 313 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 MED4Q9NPJ6 270 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 LRFN1Q9P244 771 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 ATP6V1HQ9UI12 483 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 PCDHGA10Q9Y5H3 936 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 SPENQ96T58 3664 aaKnown RBP12.55□□□□□ -0.4
COL1A1-208ENST00000494334 CNTRLQ7Z7A1 2325 aa12.55□□□□□ -0.4
COL1A1-208ENST00000494334 SPTA1P02549 2419 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 BOD1L1Q8NFC6 3051 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 C2orf92A0A1B0GVN3 265 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 TTLL8A6PVC2 850 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 SCAMP2O15127 329 aaKnown RBP12.54□□□□□ -0.4
COL1A1-208ENST00000494334 SLC28A2O43868 658 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 NEURL1O76050 574 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 PRPS1L1P21108 318 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 NTSP30990 170 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 FRKP42685 505 aaPredicted RBP12.54□□□□□ -0.4
COL1A1-208ENST00000494334 HLCSP50747 726 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 SSR4P51571 173 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 MLLT10P55197 1068 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 CLDN8P56748 225 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 OGFOD2Q6N063 350 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 RGS9BPQ6ZS82 235 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 ZNF605Q86T29 641 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 RIMKLAQ8IXN7 391 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 ZNF441Q8N8Z8 693 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 OR7G2Q8NG99 324 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 OR7A2PQ8NGA2 310 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 OR52R1Q8NGF1 315 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 C16orf52Q8NHV5 167 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 CIDECQ96AQ7 238 aaPredicted RBP12.54□□□□□ -0.4
COL1A1-208ENST00000494334 AMDHD1Q96NU7 426 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 GAL3ST4Q96RP7 486 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 WWTR1Q9GZV5 400 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 BCAP29Q9UHQ4 241 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 DTX4Q9Y2E6 619 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 USH1CQ9Y6N9 552 aa12.54□□□□□ -0.4
COL1A1-208ENST00000494334 CPAMD8Q8IZJ3 1885 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 PLOD2O00469 737 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 PDPK1O15530 556 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 PLOD3O60568 738 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 PRAMEF2O60811 474 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 BCAS2O75934 225 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-208ENST00000494334 OR6B1O95007 311 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 NADKO95544 446 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-208ENST00000494334 ALDOCP09972 364 aaKnown RBP12.53□□□□□ -0.4
COL1A1-208ENST00000494334 LAMP1P11279 417 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 GPX3P22352 226 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 HPCAL1P37235 193 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 RPL3P39023 403 aaKnown RBP12.53□□□□□ -0.4
COL1A1-208ENST00000494334 SOX3P41225 446 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 EMDP50402 254 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 C21orf58P58505 322 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 ZNF766Q5HY98 468 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 FHL5Q5TD97 284 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms