RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 POLE4Q9NR33 117 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 TMEM181Q9P2C4 612 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 SH2B3Q9UQQ2 575 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 GRXCR2A6NFK2 248 aa18.27■□□□□ 0.51
COL27A1-207ENST00000494090 MRPL3P09001 348 aaKnown RBP18.27■□□□□ 0.51
COL27A1-207ENST00000494090 RABIFP47224 123 aa18.27■□□□□ 0.51
COL27A1-207ENST00000494090 HK3P52790 923 aa18.27■□□□□ 0.51
COL27A1-207ENST00000494090 KDELC1Q6UW63 502 aa18.27■□□□□ 0.51
COL27A1-207ENST00000494090 HS3ST5Q8IZT8 346 aa18.27■□□□□ 0.51
COL27A1-207ENST00000494090 OR52P1PQ8NH57 321 aa18.27■□□□□ 0.51
COL27A1-207ENST00000494090 FEVQ99581 238 aa18.27■□□□□ 0.51
COL27A1-207ENST00000494090 URM1Q9BTM9 101 aaKnown RBP18.27■□□□□ 0.51
COL27A1-207ENST00000494090 RGPD1P0DJD0 1748 aa18.27■□□□□ 0.51
COL27A1-207ENST00000494090 PHYHO14832 338 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 RBMXP38159 391 aaKnown RBP18.26■□□□□ 0.51
COL27A1-207ENST00000494090 NFATC3Q12968 1075 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 ARSJQ5FYB0 599 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-207ENST00000494090 ARHGAP11AQ6P4F7 1023 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 ZNF852Q6ZMS4 543 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 ARHGAP12Q8IWW6 846 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 TMEM130Q8N3G9 435 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 KCNIP3Q9Y2W7 256 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 ERP29P30040 261 aaKnown RBP18.26■□□□□ 0.51
COL27A1-207ENST00000494090 TMED4Q7Z7H5 227 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 NENFQ9UMX5 172 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 IRS2Q9Y4H2 1338 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 IGLON5A6NGN9 336 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 I3L521 148 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 ADAP00813 363 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 PRSS56P0CW18 603 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 MAP2K3P46734 347 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 ACTA2P62736 377 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 ACTG2P63267 376 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 FOXK1P85037 733 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 ODF4Q2M2E3 257 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 HSD17B12Q53GQ0 312 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 CDKL4Q5MAI5 379 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 OR4C11Q6IEV9 310 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 TOR1AIP2Q8NFQ8 470 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 BRF2Q9HAW0 419 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 SLC22A31A6NKX4 558 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 SCO2O43819 266 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 RAB28P51157 221 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 ZNF789Q5FWF6 425 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 OR5T2Q8NGG2 359 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 C14orf119Q9NWQ9 140 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 CARD8Q9Y2G2 431 aa18.26■□□□□ 0.51
COL27A1-207ENST00000494090 A6NCN8 305 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 HOXB9P17482 250 aaPredicted RBP18.25■□□□□ 0.51
COL27A1-207ENST00000494090 RORAP35398 523 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 NFE2L1Q14494 772 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 SLC39A5Q6ZMH5 540 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 CLECL1Q8IZS7 167 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 SCRN2Q96FV2 425 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 TRAV6A0A075B6T7 132 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 CTSAP10619 480 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 INHBCP55103 352 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 IL17FQ96PD4 163 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 ZNF559Q9BR84 538 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 BOCQ9BWV1 1114 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 SLCO3A1Q9UIG8 710 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 MAGEA12P43365 314 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 GRK1Q15835 563 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 BTBD16Q32M84 506 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 C22orf42Q6IC83 251 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 ANKRD13BQ86YJ7 626 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 Q8N402 240 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 CD200R1Q8TD46 325 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 BADQ92934 168 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 NEDD4LQ96PU5 975 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 RBCK1Q9BYM8 510 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 RABL2AQ9UBK7 228 aaPredicted RBP18.25■□□□□ 0.51
COL27A1-207ENST00000494090 KLHL21Q9UJP4 597 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 ABCG2Q9UNQ0 655 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 RABL2BQ9UNT1 228 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 GXYLT2A0PJZ3 443 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 PRKYO43930 277 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 GPR37L1O60883 481 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 ETFAP13804 333 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 PTNP21246 168 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 GCGRP47871 477 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 METTL2BQ6P1Q9 378 aaKnown RBP18.25■□□□□ 0.51
COL27A1-207ENST00000494090 CRTC1Q6UUV9 634 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 CEACAM19Q7Z692 300 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 VTCN1Q7Z7D3 282 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 LHFPL3Q86UP9 236 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 LRRTM3Q86VH5 581 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 METTL27Q8N6F8 245 aaPredicted RBP18.25■□□□□ 0.51
COL27A1-207ENST00000494090 LRR1Q96L50 414 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 PELI2Q9HAT8 420 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 A6NHS1 94 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 GKN3PP0CG01 181 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 IL4RP24394 825 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 SGCAQ16586 387 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 UGT8Q16880 541 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 ALG10BQ5I7T1 473 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 SSX6Q7RTT6 188 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 NETO1Q8TDF5 533 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 TCEAL3Q969E4 200 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms